Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_O01
(849 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 70 2e-14
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 66 4e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 66 4e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 65 7e-13
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 64 1e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 63 3e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 3e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 5e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 7e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 55 1e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 6e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 48 1e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 41 2e-05
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 41 2e-05
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 41 2e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 7e-05
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.013
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.031
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.7
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 70.1 bits (164), Expect = 2e-14
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Frame = +1
Query: 166 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 339
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 340 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 507
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 508 KFGSRMHNSDEMDFVI--DKRIYSM---FESGAWDV 600
KFGS N D++ + +K + ++SG WD+
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.1 bits (154), Expect = 4e-13
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = +1
Query: 118 STRSSQRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 297
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 298 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 471
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 472 DNWPNDMQTCTFKFGSRMHNSDEMDFVI 555
+P D Q C KFGS ++ +++D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.1 bits (154), Expect = 4e-13
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = +1
Query: 118 STRSSQRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 297
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 298 GCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQL 471
G L ++ +LW+PD+++ N+A G Y V++NGS ++ + + +
Sbjct: 124 GGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDI 183
Query: 472 DNWPNDMQTCTFKFGSRMHNSDEMDFVI 555
+P D Q C KFGS ++ +++D V+
Sbjct: 184 TWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 65.3 bits (152), Expect = 7e-13
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 133 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 312
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 313 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 486
L ++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPF 120
Query: 487 DMQTCTFKFGSRMHNSDEMDFVI 555
D Q C KFGS ++ +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 64.5 bits (150), Expect = 1e-12
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 133 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 312
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 313 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 486
L ++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPF 120
Query: 487 DMQTCTFKFGSRMHNSDEMDFVI 555
D Q C KFGS ++ +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 64.1 bits (149), Expect = 2e-12
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 133 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 312
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 313 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 486
L ++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPF 120
Query: 487 DMQTCTFKFGSRMHNSDEMDFVI 555
D Q C KFGS ++ +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 63.7 bits (148), Expect = 2e-12
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Frame = +1
Query: 151 PPPDSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVS 321
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 322 SERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 492
S+ +W PD+ + N+ T G V ++GSVS + + + +WP D
Sbjct: 121 SDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDT 180
Query: 493 QTCTFKFGSRMHNSDEMDFVIDKRIYSM---FESGAWDVTALSS 615
C FGS +H+ +E++ +DK+ + M + WD + +
Sbjct: 181 HRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWDFKVIKA 224
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 63.3 bits (147), Expect = 3e-12
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 133 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 312
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 313 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 486
L ++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPF 120
Query: 487 DMQTCTFKFGSRMHNSDEMDFVI 555
D Q C KFGS ++ +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 63.3 bits (147), Expect = 3e-12
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Frame = +1
Query: 133 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 312
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 313 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 486
L + RLW+PDV++ N+A G Y V NNG+ ++ + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 487 DMQTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDV 600
D Q C KFGS ++ ++D + I S +G WD+
Sbjct: 158 DDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 133 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 312
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 313 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 486
L ++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPF 120
Query: 487 DMQTCTFKFGSRMHNSDEMDFVI 555
D Q C KFGS ++ +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +1
Query: 133 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 312
+R + ++ +TL + ++ E + A L++ W+D L WN E+G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 313 L-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 486
L ++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P
Sbjct: 61 LRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPF 120
Query: 487 DMQTCTFKFGSRMHNSDEMDFVI 555
D Q C KFGS ++ +++D V+
Sbjct: 121 DDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 8e-12
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +1
Query: 247 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 420
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 421 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 546
V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Frame = +1
Query: 166 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 339
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 340 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 516
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 517 SRMHNSDEMD 546
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 61.3 bits (142), Expect = 1e-11
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +1
Query: 247 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 411
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 412 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 546
G VSW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 60.1 bits (139), Expect = 3e-11
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Frame = +1
Query: 169 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 336
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 337 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 513
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 514 GSRMHNSDEMD 546
GS ++ ++D
Sbjct: 164 GSWTYDGIQID 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Frame = +1
Query: 166 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 339
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 340 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 507
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 508 KFGSRMHNSDEMD 546
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.6 bits (128), Expect = 5e-10
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Frame = +1
Query: 136 RTIGTPPPDSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CST 309
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 310 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 477
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 478 WPNDMQTCTFKFGSRMHNSDEMD 546
+P D QTC KFGS ++ +D
Sbjct: 152 FPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 55.2 bits (127), Expect = 7e-10
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +1
Query: 169 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 345
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 346 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 520 RMHNSDEMD 546
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.8 bits (126), Expect = 1e-09
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 208 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 378
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 379 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 51.2 bits (117), Expect = 1e-08
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +1
Query: 151 PPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSE 327
P + ++ L ++H N+ E TV L++ W L+W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 328 RLWRPDVVL--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQ 495
+W PD+V+ + + ++ V N+G++ + TP+ + D+ WP D+
Sbjct: 114 EIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDIL 171
Query: 496 TCTFKFGSRMHNSDEM 543
CT S H S+E+
Sbjct: 172 NCTIHIASWSHGSNEI 187
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 50.4 bits (115), Expect = 2e-08
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 6/145 (4%)
Frame = +1
Query: 136 RTIGTPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 306
R G D +V + L +R A I + + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 307 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDN 477
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 478 WPNDMQTCTFKFGSRMHNSDEMDFV 552
+P D Q C+ + S +D++ F+
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 6e-08
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 208 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 387
+ E + + + +W D RLS+ S + ER+WRPD N +
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTI 135
Query: 388 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
+ R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 136 TVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.6 bits (108), Expect = 1e-07
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Frame = +1
Query: 136 RTIGTPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 306
R G D VV + + +R + I + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 307 TWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDN 477
T L + R+W PD+ N + + R+ NGSV + R+ ++ M L
Sbjct: 108 T-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
Query: 478 WPNDMQTCTFKFGSRMHNSDEMDFV 552
+P D Q C+ + S +D++ F+
Sbjct: 167 YPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 208 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 387
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 388 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 40.7 bits (91), Expect = 2e-05
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 118 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 291
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 292 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 465
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 466 QLDNWPNDMQTCTFKFGSRMHNSDEMDFV 552
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 40.7 bits (91), Expect = 2e-05
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 118 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 291
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 292 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 465
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 466 QLDNWPNDMQTCTFKFGSRMHNSDEMDFV 552
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 40.7 bits (91), Expect = 2e-05
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 118 STRSSQRTIGTPPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAG 291
STR +R + PP + VN++ L L A+ ES ++ LQ W D RL + N
Sbjct: 71 STRYDKRLL--PPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 292 EWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 465
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 466 QLDNWPNDMQTCTFKFGSRMHNSDEMDFV 552
+L+ +P D C+F S + + +V
Sbjct: 189 RLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 7e-05
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Frame = +1
Query: 145 GTPPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVS 321
G PP + V +T++ L +++ E + + + W D RL++ G T V
Sbjct: 32 GGPP----VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVG 86
Query: 322 SE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 474
SE +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L
Sbjct: 87 SEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQ 143
Query: 475 NWPNDMQTCTFKFGS 519
+P D Q C + S
Sbjct: 144 YFPMDRQLCHIEIES 158
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 37.5 bits (83), Expect = 2e-04
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = +1
Query: 205 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 378
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 379 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 549
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
Query: 550 V 552
+
Sbjct: 163 I 163
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 259 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 411
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 412 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 259 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 411
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 412 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 519
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 495
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 496 TCTFKFGSRMHNSDEMDFVID 558
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 33.9 bits (74), Expect = 0.002
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +1
Query: 169 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 342
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 343 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 516
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 517 SRMHNSDEMDFV 552
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.013
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 331 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 501
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 502 TFKFGSRMHNSDEM 543
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.9 bits (64), Expect = 0.031
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = +1
Query: 169 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 330
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 331 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 495
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 496 TCTFKFGSRMHNSDEM 543
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.0 bits (47), Expect = 3.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 608 CPVRCXARTVARWKLAWQCS 667
C VRC A + RW W+ S
Sbjct: 19 CSVRCSAASGLRWFEIWRDS 38
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 110 GQ*CCVFAFCRTSYSTSEEKXVTRII 33
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 312 PSAAAPLPCVPTQS 271
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,590
Number of Sequences: 438
Number of extensions: 4585
Number of successful extensions: 90
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -