Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_N24
         (899 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.4  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   9.6  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 16/75 (21%), Positives = 32/75 (42%)
 Frame = +1

Query: 259  LNMFEVQQKKKHYADQNTSSGTPQERECSIRKSCNNVSVTSMEDLSHEEIVTSYVLAHVA 438
            LN    +QK+K Y  Q  +SG   E++   +K  +      ++++S   +  +     ++
Sbjct: 993  LNNSLTEQKQKSYK-QIDASGEAVEKKAQYKKEVDEKFAEEVDNISQTVVSKAQFAMDLS 1051

Query: 439  QFDCRRHHMAFTNGN 483
            QF    +      GN
Sbjct: 1052 QFGVLTNQHGVVTGN 1066


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 328 QERECSIRKSCNNVSVTSMEDLSH 399
           +ER+ ++ K C  + V  +E++SH
Sbjct: 115 KERDDAVAKLCRTMDVRCVENVSH 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,920
Number of Sequences: 2352
Number of extensions: 14246
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)