Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_N24
         (899 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    44   2e-04
X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ...    29   8.7  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +1

Query: 307 NTSSGTPQERECSIRKSCNNVS--VTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNG 480
           N  +  P   EC    +   V+   T   ++  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 481 NTTRNKLLQEIKKSQVKLRSHNRSNN 558
             TR+KL  E+K      + H R +N
Sbjct: 171 VRTRSKLQAELKAFTFDKKRHARDDN 196


>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
           variegation protein3-7 protein.
          Length = 1169

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
 Frame = +1

Query: 202 PSSLHQK*DQDSTLTGVTCLNM-FEVQQKKKHYADQNTSSGTPQEREC---SIRKSCNNV 369
           P  LH+  D D TL      N+   V  + +H    N S  + QEREC   + +KS    
Sbjct: 122 PWILHE--DSDGTLAFCLYCNISINVNNRSRHIQQHNVSL-SHQERECNYLAFKKSEEET 178

Query: 370 -SVTSMEDLSHEEIVTSYVLA 429
               S  ++ HE    SYV A
Sbjct: 179 RGAISSNEIKHEFGTKSYVAA 199


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,780,137
Number of Sequences: 53049
Number of extensions: 638571
Number of successful extensions: 1362
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)