Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_N23
         (894 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
 Frame = +1

Query: 427  TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL---SIPLPTRRVNNPAPAV 585
            TAATT+G+     ++ ++P+ S            TT     + LP   V  P P +
Sbjct: 1283 TAATTIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVI 1338


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 480 VNVDAPLPEPLSHGGSC 430
           +NVD   P P  +GG+C
Sbjct: 221 LNVDDCKPNPCQNGGTC 237


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory
          receptor candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 15 VRPSSAPPHGAHLTRAEQA 71
          V+PS+ PP  + L+ A+ A
Sbjct: 3  VQPSNTPPEKSQLSTADTA 21


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory
          receptor candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 15 VRPSSAPPHGAHLTRAEQA 71
          V+PS+ PP  + L+ A+ A
Sbjct: 3  VQPSNTPPEKSQLSTADTA 21


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory
          receptor candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 15 VRPSSAPPHGAHLTRAEQA 71
          V+PS+ PP  + L+ A+ A
Sbjct: 3  VQPSNTPPEKSQLSTADTA 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,634
Number of Sequences: 336
Number of extensions: 5298
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24823920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)