Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N23
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 97 1e-20
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 78 1e-14
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 65 6e-11
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 55 6e-08
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 41 0.001
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 41 0.001
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 41 0.001
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 38 0.010
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.28
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.48
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 30 1.9
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 30 1.9
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 29 5.9
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.9
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 5.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 5.9
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 29 5.9
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 29 5.9
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.8
U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 28 7.8
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 97.1 bits (231), Expect = 1e-20
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Frame = +1
Query: 94 LFFDIAKAFDKVWHNGLIYKLYNMGMPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 273
++ D +KAFD++ H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 274 VPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMG 447
VPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ+A +
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVV 135
Query: 448 QWFRKWRIDINPTKSTAVLFKRGR 519
W + ++ +N +K+ V + R
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGKRR 159
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 77.8 bits (183), Expect = 1e-14
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 2/227 (0%)
Frame = +1
Query: 10 HSCVHQVHRLTEHILLGLNRRKPILTGALF-FDIAKAFDKVWHNGLIYKLYN-MGMPDRL 183
HS V ++T I+ GLN + P + D+ AFDKV L L G+ ++
Sbjct: 443 HSTTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKI 502
Query: 184 VLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLALF 363
L + +YL R R + S+ + GVPQGS +SP LF+ Y+ D+P +T L +
Sbjct: 503 KLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLISY 562
Query: 364 ADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLSI 543
ADD +I +K ++Q + ++ ++ + I+ KST +F
Sbjct: 563 ADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVFSCD--------- 613
Query: 544 PLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHI 684
P P I D PIP K LG+TL++ + H+
Sbjct: 614 --PKEHKTKP-----DIYWMDDPIPVINAPKLLGITLNTMTGTKDHV 653
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 65.3 bits (152), Expect = 6e-11
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Frame = +1
Query: 112 KAFDKVWHNGLIYKLYNMGMPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGS 288
KAFD+V H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 289 ALSPLLFSLYINDIPRS--PETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRK 462
P LF ++IN + S P + FADD +Y L +QT + W
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY--SHSPPL----IQTTIDLITTWSEN 115
Query: 463 WRIDINPTKSTAVLFKRGRPPNTTLSI-PLPTRRVNNPAPAVR----------------- 588
++ + K+ A+L K G N L + PL V A R
Sbjct: 116 NKLPLAVHKA-ALLNKLGFSSNCVLLLAPLINSLVCRLLAASRTGVSTVAHSKTCLLHLG 174
Query: 589 ---PITMYD-QPIPWAPK--VKYLGVTLDSRMTFRPHIKTV 693
P T+Y +P +P + LG+ DS++TF+PHIK +
Sbjct: 175 KKNPKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI 215
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 55.2 bits (127), Expect = 6e-08
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Frame = +1
Query: 151 KLYNMGMPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPLLFSLYIND 327
KL G+ +++L NR+F ++ S+ + +++GVPQGS PLLF L+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 328 --IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAV 501
I +P +++ FADD I+++ +Q + + W + + + PTKS A+
Sbjct: 899 LLIDLAPTINISCFADDVKIFHTD------PTIIQNSIDIIVSWSKLNELPLAPTKS-AL 951
Query: 502 LFKRGRPPNTTLSI 543
L R N + S+
Sbjct: 952 LALGTRNKNQSYSV 965
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +1
Query: 94 LFFDIAKAFDKVWHNGLIYKLYNMGMPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTA 270
+ F ++ AFDKV H LI KL + + L R +S ++F +V +H
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 271 GVPQGSALSPLLFSLYIN----DIPRSPETHLALFADDTAIY 384
G P+GS +F ++IN +IP + ++D IY
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIY 991
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/108 (28%), Positives = 46/108 (42%)
Frame = +1
Query: 13 SCVHQVHRLTEHILLGLNRRKPILTGALFFDIAKAFDKVWHNGLIYKLYNMGMPDRLVLI 192
S + +H L LL + R I +F D KAFD V H + L G + +
Sbjct: 664 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDL 721
Query: 193 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPR 336
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 722 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 768
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/108 (28%), Positives = 46/108 (42%)
Frame = +1
Query: 13 SCVHQVHRLTEHILLGLNRRKPILTGALFFDIAKAFDKVWHNGLIYKLYNMGMPDRLVLI 192
S + +H L LL + R I +F D KAFD V H + L G + +
Sbjct: 403 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDL 460
Query: 193 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPR 336
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 461 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 507
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/108 (28%), Positives = 46/108 (42%)
Frame = +1
Query: 13 SCVHQVHRLTEHILLGLNRRKPILTGALFFDIAKAFDKVWHNGLIYKLYNMGMPDRLVLI 192
S + +H L LL + R I +F D KAFD V H + L G + +
Sbjct: 493 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDL 550
Query: 193 IRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFSLYINDIPR 336
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 551 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 597
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +1
Query: 94 LFFDIAKAFDKVWHNGLIYKLYNMGMPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 273
+F D KAFD V H + L G + + ++++ N + + R VT G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 274 VPQGSALSPLLFSLYINDIPR 336
V QG +SP LFS + + R
Sbjct: 99 VRQGDPISPNLFSACLEHVFR 119
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 490 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 627
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 490 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 627
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 508 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMYDQPIPWAP 627
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 329 ISLIYKLNSNGERAEPCGTPAVT*RGRER 243
ISL S GER +PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +1
Query: 535 LSIPLPTRRVNNPAPAVRPITMYDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDR 702
++ PLP+ P VRP T +D IP+ ++G + T + R R
Sbjct: 890 MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQR 944
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 550 PTRRVNNPAPAVRPITMYDQPIPW 621
P R V++P +PIT++DQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.9
Identities = 36/162 (22%), Positives = 58/162 (35%)
Frame = +2
Query: 128 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYY 307
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 337 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 396
Query: 308 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 487
+ + P S M P S+T G + I +GS S T
Sbjct: 397 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 456
Query: 488 KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSP 613
+Q G +L T ++ S S P S T+ P
Sbjct: 457 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEP 496
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical protein
K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.9
Identities = 36/162 (22%), Positives = 58/162 (35%)
Frame = +2
Query: 128 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYY 307
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 544 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 603
Query: 308 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 487
+ + P S M P S+T G + I +GS S T
Sbjct: 604 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 663
Query: 488 KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSP 613
+Q G +L T ++ S S P S T+ P
Sbjct: 664 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEP 703
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 5.9
Identities = 36/162 (22%), Positives = 58/162 (35%)
Frame = +2
Query: 128 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYY 307
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 544 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 603
Query: 308 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 487
+ + P S M P S+T G + I +GS S T
Sbjct: 604 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 663
Query: 488 KAQRCSSKGVALRTPR*ASLSRLGASITPPPPFAQSRCTTSP 613
+Q G +L T ++ S S P S T+ P
Sbjct: 664 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEP 703
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 28.7 bits (61), Expect = 5.9
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +2
Query: 170 CQTGS-CSSYETTCRT-VRSDIESRE--RVPGPVTSQP-ESRKAPPSPRYYSVCISTIYP 334
C GS C S C ++D+ + E VP P TSQP + PP+ V I T+ P
Sbjct: 306 CGKGSICDSVIPVCVCPAQTDLSNGECISVPAP-TSQPVQVMTPPPTLPPVQVPIQTLPP 364
Query: 335 GLRRPIWRSSPMT-PPSTTRVGRRRCFIDDFRPQLPPW 445
R P +T PP T V + F RP +P +
Sbjct: 365 QTRPPQLPPVQITQPPIQTPV--QPIFFQTTRPPMPTY 400
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.7 bits (61), Expect = 5.9
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +2
Query: 170 CQTGS-CSSYETTCRT-VRSDIESRE--RVPGPVTSQP-ESRKAPPSPRYYSVCISTIYP 334
C GS C S C ++D+ + E VP P TSQP + PP+ V I T+ P
Sbjct: 403 CGKGSICDSVIPVCVCPAQTDLSNGECISVPAP-TSQPVQVMTPPPTLPPVQVPIQTLPP 461
Query: 335 GLRRPIWRSSPMT-PPSTTRVGRRRCFIDDFRPQLPPW 445
R P +T PP T V + F RP +P +
Sbjct: 462 QTRPPQLPPVQITQPPIQTPV--QPIFFQTTRPPMPTY 497
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 254 PVTSQPESRKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGR 400
P T+ + +P + +S +P LRR +S P PP+TT R
Sbjct: 131 PTTTTTPAPTTTTTPNFLEKSLSMFFPSLRRKP-QSIPTLPPTTTPTPR 178
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 566 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 441
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>U29377-8|AAA68716.1| 218|Caenorhabditis elegans Hypothetical
protein K05F1.9 protein.
Length = 218
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 PVTSQPESRKAPPSPRYYSVCISTIYPGLR-RPIWRSSPMTPPSTTRVGRRRCFIDDFRP 430
P T PE+ K YY +T+ + R +W+++ + G RR FID +P
Sbjct: 87 PATVIPENNKHY-FVVYYIKAANTVKEKIPVRDLWKAAASSE------GTRRVFIDFKKP 139
Query: 431 QLPPWDSGSG 460
+LPP ++ G
Sbjct: 140 ELPPTEAEDG 149
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 596 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 453
V+GRT G LL + GM++++ P LK + F+GL + H N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,873,652
Number of Sequences: 27780
Number of extensions: 535874
Number of successful extensions: 1862
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1853
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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