Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_N20
         (832 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    25   0.97 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   2.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.1  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 24.6 bits (51), Expect = 0.97
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -3

Query: 548 DGTEAGR--RVRQAARPRLQHGPPRLEPPRSXYSFAGA 441
           D   +GR  R R+  +P  + G P  E  R   +F+GA
Sbjct: 201 DRPSSGRSPRTRRVKKPGAKQGAPTAEEKRPRTAFSGA 238


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 271 RCDVRSARSRSGRSEDTALSPSRRRA 348
           R D+R+A+   GRS + ALS   R+A
Sbjct: 38  REDIRTAKFARGRSINMALSNRGRKA 63


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 271 RCDVRSARSRSGRSEDTALSPSRRRA 348
           R D+R+A+   GRS + ALS   R+A
Sbjct: 38  REDIRTAKFARGRSINMALSNRGRKA 63


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 271 RCDVRSARSRSGRSEDTALSPSRRRA 348
           R D+R+A+   GRS + ALS   R+A
Sbjct: 38  REDIRTAKFARGRSINMALSNRGRKA 63


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 445 PAKEXFERGGSNLGGPCW 498
           P  E F  GG  +  PCW
Sbjct: 369 PKGEIFHMGGDEVYIPCW 386


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 240  CHALTRKNVAALRRPQRAIAVRAIRGYRTVSFE 338
            CH +  +    ++ P R +   A +G + VSF+
Sbjct: 1683 CHNIKTQGWTVVQDPNRRMGPYAYKGDQWVSFD 1715


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 366 PWDLEAEALA 395
           PWD  AEALA
Sbjct: 332 PWDKNAEALA 341


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 165 KKW*SLGKRWKGVVRSMALYGAPV 236
           K W ++ K W  +  SM  YG+ +
Sbjct: 137 KHWVTIMKEWSFMEMSMRNYGSSI 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,003
Number of Sequences: 336
Number of extensions: 2665
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)