Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N20
(832 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.093
SB_42927| Best HMM Match : Spore_permease (HMM E-Value=1.1) 32 0.50
SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07) 31 1.5
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_18906| Best HMM Match : LSM (HMM E-Value=3.2e-15) 30 2.0
SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_8337| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_58523| Best HMM Match : Tctex-1 (HMM E-Value=1.8e-11) 29 4.6
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 29 4.6
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 4.6
SB_31229| Best HMM Match : TP2 (HMM E-Value=1.7) 29 6.1
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 29 6.1
SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086) 29 6.1
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_12780| Best HMM Match : SAC3_GANP (HMM E-Value=3.7e-07) 28 8.1
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.1
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 34.7 bits (76), Expect = 0.093
Identities = 27/74 (36%), Positives = 32/74 (43%)
Frame = -3
Query: 491 GPPRLEPPRSXYSFAGAPFPPRAKLXTPPVIGSERLRLQVPGWRPGEQARRLEGDSAVSS 312
GPPR P + G PF PR PP G R + P + R + DS S
Sbjct: 404 GPPRPMGPPGPH---GPPFGPRGP---PPHGGPPRGPMGPGPGMPPMRPGRFDHDSEHSR 457
Query: 311 DRPDRDRALRTSQR 270
DR DRDR R+ R
Sbjct: 458 DRADRDRLARSFDR 471
>SB_42927| Best HMM Match : Spore_permease (HMM E-Value=1.1)
Length = 670
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTN----ELATKIEEHTNLLLENTKKMV 175
E KK+K KE +G +RE++T TLN N + +E L+N KK +
Sbjct: 568 ERKKQKRKEEKAGGGSCLREVTTKLENVTLNASNNTTPQSYTSNPDEVKEKKLKNLKKKL 627
Query: 176 ELRETLE 196
E L+
Sbjct: 628 RQIEDLQ 634
>SB_42662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +2
Query: 89 FTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEGGGAVDGTIRGSRMVPRPDPQERR 268
F LN + + + + T + +N + M + LEGG + + RG + P P + +
Sbjct: 435 FALNMSLDTESLHMRKSTLVSADNIQ-MTCAQSLLEGGAVISTSARGPQRGMGPAPGQEK 493
Query: 269 GAATSAARDRGQGDP 313
G S G+G P
Sbjct: 494 GGTGSGGGHGGEGGP 508
>SB_23465| Best HMM Match : Pkinase_Tyr (HMM E-Value=3.1e-07)
Length = 1118
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 232 PYGATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSP--GRHPGTWRRRRSLPIT 405
P G+ P P+ T++ S+ S +ALSPS A SP G S PI
Sbjct: 293 PLGSEPEPSGTNQTEAADSSTQDSSAVTGSALSPSTGSASSPVAGSTSSPVTGSTSSPIA 352
Query: 406 GGVXSFALGGK 438
G V S +GGK
Sbjct: 353 GSVSS-PVGGK 362
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/72 (36%), Positives = 27/72 (37%)
Frame = +1
Query: 184 GNVGRGWCGRWHYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGR 363
G GRG GR Y PY P RR S SR + D P R R PGR
Sbjct: 754 GGRGRGGRGRGGYNA-PYDNRGKPGDVRRRSPP-SGPSRGFQDRDRG-PPGRGRDAPPGR 810
Query: 364 HPGTWRRRRSLP 399
G R R P
Sbjct: 811 GQGYTNRGRGQP 822
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/72 (31%), Positives = 30/72 (41%)
Frame = -3
Query: 548 DGTEAGRRVRQAARPRLQHGPPRLEPPRSXYSFAGAPFPPRAKLXTPPVIGSERLRLQVP 369
DG RR R A+P L P + P S PP+AK+ PV+ S P
Sbjct: 38 DGGNTNRRTRIQAKPALNLPSPPSKTPSSV--------PPQAKVDETPVLPSPPTNTPRP 89
Query: 368 GWRPGEQARRLE 333
P + RRL+
Sbjct: 90 SRIPRLKRRRLQ 101
>SB_18906| Best HMM Match : LSM (HMM E-Value=3.2e-15)
Length = 443
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTN-ELATKI---EEHTNLLLENTKKM 172
EL + + +E N+G V+ + ++T +N N +L ++ + H N++LEN K+M
Sbjct: 5 ELAQREQEEFNTGPLSVLTQSVKNNTQVLINCRNNRKLLARVKAFDRHCNMVLENVKEM 63
>SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 14 KKEKSKERNSGSREVMRELS-TSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVEL 181
K+EK E++ EV R T + T DT ELA K+ E+ + + T+KM+ +
Sbjct: 582 KEEKLLEKDLIFEEVTRLADRTKNKAETGKEDTLELAKKVNEYQAKIKDTTRKMMAM 638
>SB_8337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = +2
Query: 62 RELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRETLEGGGAVDGTIRGSRMV 241
R ++ S T T NP NELAT++ + ++ T K + G DG ++++
Sbjct: 75 RPVARSRTVGTSNPSDNELATRLPYNVVEGIDPTFKRAP-----KSPGKDDGEEEKAKVI 129
Query: 242 PRPDPQERRGAATSAARDRGQ 304
P P RR R+ +
Sbjct: 130 PLIKPHRRRSGDRKKNRENSE 150
>SB_58523| Best HMM Match : Tctex-1 (HMM E-Value=1.8e-11)
Length = 541
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 5 GELKKEKSK--ERNSGSREVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVE 178
G+LK+ S+ + NS +++ T + T+ ++PD + K+EE +L T VE
Sbjct: 400 GDLKETDSEHSDANSVLEDLVNCKRTYENTYKIDPDVSFPVAKVEEIIRGVLSETLSSVE 459
Query: 179 LRET 190
T
Sbjct: 460 YNVT 463
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -3
Query: 656 KVPAKTTMAGQHXRQPEGEASAVAAHPVRENRADRLDGTEAGRRVRQA-ARPRLQHGPPR 480
K P K T+AG+ P+ + + A +++++ + + R + ++PR QH P
Sbjct: 851 KEPPKPTLAGEKM-SPQPQLTMTAPKSKQQSQSIATEQLNSQRTSQPTLSQPRSQHPPKA 909
Query: 479 LEPPRSXYSFAGAP 438
+ P ++ +S P
Sbjct: 910 MAPEQTLFSQPSTP 923
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = -3
Query: 548 DGTEAGRRVRQAARPRLQHGPPRLEPPRSXYSFAGAPFPPRAKLXTPPVIGSERLRLQVP 369
DG RR R A+P L P + P S PP+AK+ P++ S P
Sbjct: 78 DGGNTNRRTRIPAKPALNLPSPPSKTPSSV--------PPQAKVDETPLLPSPPTSTPRP 129
Query: 368 GWRPGEQARRLE 333
P + RRL+
Sbjct: 130 SHIPRLKRRRLQ 141
>SB_31229| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 676
Score = 28.7 bits (61), Expect = 6.1
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Frame = +2
Query: 2 TGELKKEKSKERNSGSR-EVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVE 178
T + + ++ R SGSR E LST D+T + + + L + +L L KK
Sbjct: 59 TSKAQLDEVSRRESGSRRESFSGLSTDDSTTSKSHGSKILTKANKLRRSLHLSGKKKKRS 118
Query: 179 LRETLEGGGAVDGT-----IRGSRMVPRPDPQERRGAATSAARDR 298
+++E G G+ ++ R +P P + R + S A R
Sbjct: 119 RADSVENGLEFKGSEENIPVKRKREIP-PSGKPRLSSTASTATPR 162
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 566 NRADRLDGTEAGRRVRQAARPRLQHGPPRLEPP 468
+R+DR D A RR RPRLQ PR +PP
Sbjct: 545 DRSDRYDDHGADRRDAPKERPRLQL-QPRTKPP 576
>SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086)
Length = 627
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 524 VRQAARPRLQHGPPRLEPPRSXYSFAGAPFPPRAKLXTPPV 402
V A P + PPR PP++ P PP A++ PP+
Sbjct: 144 VHGLAHPSITQPPPRHSPPQTPVP-PPPPLPPFAQVSLPPL 183
>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 2 TGELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNELATKIEEHTNLLL---ENTKKM 172
T L+KE ++ + S S+ +R++S+ + T + P + + K+E+ LL EN KK
Sbjct: 697 TNSLQKELAEAKLSESK-ALRKVSSLEETLSKAPANSNASEKLEQLEKELLESRENEKKS 755
Query: 173 VELRETLEG 199
LEG
Sbjct: 756 SAAVTRLEG 764
>SB_12780| Best HMM Match : SAC3_GANP (HMM E-Value=3.7e-07)
Length = 436
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 334 SRRRACSPGRHPGTWRRRRSLPITGGVXSFALGGKGAPA 450
+RR C R PGT + SLP G S L G P+
Sbjct: 91 TRRIICRAARDPGTLLSKPSLPYPGYTPSNQLAGTTRPS 129
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVEL 181
+L+ EK R + +S S+ L D NEL+ +EE+ L E K++ L
Sbjct: 1097 DLRNEKENLRALLESKEQLVMSYSEEMKNLTKDNNELSVLVEEYQVKLHEKDKELTNL 1154
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 286 CGRRSA--ATFLRVRAWHHTGAPYSAIDRTTPF 194
CGRR A A R R HH AP + D + PF
Sbjct: 390 CGRRFAIPAWLTRHRMVHHKSAPQTTYDPSKPF 422
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/50 (44%), Positives = 23/50 (46%)
Frame = +1
Query: 244 TP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRS 393
+P P RR D S SR R T P RRR SP P RRRRS
Sbjct: 890 SPSPPPRRRRRDSYSP-SRRRRDSPTPSPPPRRRRKSPSPSPPR-RRRRS 937
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,838,036
Number of Sequences: 59808
Number of extensions: 385081
Number of successful extensions: 1852
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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