Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N20
(832 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 58 1e-08
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 56 8e-08
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 33 0.36
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 33 0.36
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 33 0.36
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 33 0.36
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 33 0.48
AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p pro... 32 0.84
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 32 0.84
AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA ... 32 0.84
BT001360-1|AAN71115.1| 370|Drosophila melanogaster AT28817p pro... 30 4.5
AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE... 30 4.5
AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD... 30 4.5
AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-P... 29 5.9
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 29 5.9
AY094820-1|AAM11173.1| 609|Drosophila melanogaster LD34893p pro... 29 7.8
AE013599-2637|AAF57737.2| 609|Drosophila melanogaster CG10915-P... 29 7.8
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 58.0 bits (134), Expect = 1e-08
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Frame = +3
Query: 201 VVRSMALYGAPVWCHALTRKN-VAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDL 377
V ++ LY AP+W T+K + + R R +A+R IRG+RT+S +AA L+G P DL
Sbjct: 769 VSKATLLYAAPIWSCVSTKKTYLDSARAVSRTMALRLIRGFRTISDDAAHALSGITPIDL 828
Query: 378 EAEALAADYXXXXXXXXXXXXXXXXXXXXXXXLQSRRSVLEAWSRRLADPSAGLRTVXAV 557
+ + L+ + + W R + G T +
Sbjct: 829 DIKG------------------KYLASEGYTQLEIKEWIRGVWQTRWQESQRGRWTYKLI 870
Query: 558 RPVLADWVGRXRGCLXFRLTXMLTGHGCFGRYL 656
P L +W + + +T LT HGCF YL
Sbjct: 871 -PQLTEWADCEHKTVDYHMTQFLTDHGCFRGYL 902
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 55.6 bits (128), Expect = 8e-08
Identities = 49/163 (30%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Frame = +3
Query: 192 WKGVVRSMALYGAPVWCHALTRKNVAALRRP---QRAIAVRAIRGYRTVSFEAACLLAGA 362
+ G++ L+GAPVW T + VAA RR QR I + + RTVS A +L GA
Sbjct: 784 YDGLMAPCVLFGAPVWYD--TAEQVAAQRRLASCQRLILLGCLSVCRTVSTVALQVLGGA 841
Query: 363 PPWDLEAEALAADYXXXXXXXXXXXXXXXXXXXXXXXLQSRRSVLE-----AWSRRLADP 527
PP DL A+ LA Y + R++ LE +W R D
Sbjct: 842 PPLDLAAKLLAIKYKLKRGFPLEENDWLYGEDIACLSWEQRKTRLEECLIQSWQNRWDDD 901
Query: 528 SAGLRTVXAVRPVLADWVGRXRGCLXFRLTXMLTGHGCFGRYL 656
S R P + R + +LTGHG F +L
Sbjct: 902 SEPGRVTHRFIPYVTLAYRDPSFGFSMRTSFLLTGHGSFNAFL 944
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 151 AGEH*KNGRA*GNVGRGWCGRWHYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALS 330
+GE ++GR G GR+ TG P P P++ R +RSRS + LS
Sbjct: 84 SGESERDGREGREGGAPPYGRYPPTGGPPPGPPPPSQRYGRSRSPHSRSRSRLRKSPPLS 143
Query: 331 PSRRRACSP-GRHPGTWRR 384
P RR P H G RR
Sbjct: 144 PPPRRRSPPMAMHSGMDRR 162
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 151 AGEH*KNGRA*GNVGRGWCGRWHYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALS 330
+GE ++GR G GR+ TG P P P++ R +RSRS + LS
Sbjct: 44 SGESERDGREGREGGAPPYGRYPPTGGPPPGPPPPSQRYGRSRSPHSRSRSRLRKSPPLS 103
Query: 331 PSRRRACSP-GRHPGTWRR 384
P RR P H G RR
Sbjct: 104 PPPRRRSPPMAMHSGMDRR 122
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 151 AGEH*KNGRA*GNVGRGWCGRWHYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALS 330
+GE ++GR G GR+ TG P P P++ R +RSRS + LS
Sbjct: 84 SGESERDGREGREGGAPPYGRYPPTGGPPPGPPPPSQRYGRSRSPHSRSRSRLRKSPPLS 143
Query: 331 PSRRRACSP-GRHPGTWRR 384
P RR P H G RR
Sbjct: 144 PPPRRRSPPMAMHSGMDRR 162
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.36
Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 151 AGEH*KNGRA*GNVGRGWCGRWHYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALS 330
+GE ++GR G GR+ TG P P P++ R +RSRS + LS
Sbjct: 84 SGESERDGREGREGGAPPYGRYPPTGGPPPGPPPPSQRYGRSRSPHSRSRSRLRKSPPLS 143
Query: 331 PSRRRACSP-GRHPGTWRR 384
P RR P H G RR
Sbjct: 144 PPPRRRSPPMAMHSGMDRR 162
>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p
protein.
Length = 1872
Score = 33.1 bits (72), Expect = 0.48
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -3
Query: 440 PFPPRAKLXTPPVIGSERLRLQV-PGWRPGEQARRLEGDSAVSSDRPDRDRALRTSQRRD 264
P P + TPP I + L + P P + R G+SA D + RT R
Sbjct: 18 PMPSASAAQTPPPIPNPTPNLNIRPSTNPIPRPRSTGGESAFQPAIIPVDYSYRTHTTRS 77
Query: 263 VLAGQGVAP 237
+L+ Q +AP
Sbjct: 78 ILSAQSMAP 86
>AY069315-1|AAL39460.1| 119|Drosophila melanogaster LD03002p
protein.
Length = 119
Score = 32.3 bits (70), Expect = 0.84
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM- 172
EL +++ +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 14 ELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMW 73
Query: 173 VELRETLEG 199
EL T +G
Sbjct: 74 TELPRTGKG 82
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 32.3 bits (70), Expect = 0.84
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 512 ARPRLQHGPPRLEPPRSXYSFAGAPFPPRAKLXTP 408
A P +GPP+ PP Y GAP PP +K P
Sbjct: 242 APPSASYGPPKSAPPSQSY---GAPAPPSSKYGPP 273
>AE014297-442|AAF54135.1| 119|Drosophila melanogaster CG1249-PA
protein.
Length = 119
Score = 32.3 bits (70), Expect = 0.84
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNE-LATKI---EEHTNLLLENTKKM- 172
EL +++ +E N+G V+ + ++T +N N+ L ++ + H N++LEN K+M
Sbjct: 14 ELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMW 73
Query: 173 VELRETLEG 199
EL T +G
Sbjct: 74 TELPRTGKG 82
>BT001360-1|AAN71115.1| 370|Drosophila melanogaster AT28817p
protein.
Length = 370
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/58 (22%), Positives = 25/58 (43%)
Frame = -2
Query: 300 PRSRAADVAAPRRSCGSGRGTIREPRIVPSTAPPPSNVSLSSTIFLVFSSNRFVCSSI 127
P+ +A + GSG G ++P + P T PPP + L ++ ++ +
Sbjct: 128 PKKEEPSGSAGEEAQGSGDGPAKKPPVGPCTPPPPQTANPQHKSHLQYTEEPWILPEV 185
>AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE,
isoform E protein.
Length = 2832
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/58 (22%), Positives = 25/58 (43%)
Frame = -2
Query: 300 PRSRAADVAAPRRSCGSGRGTIREPRIVPSTAPPPSNVSLSSTIFLVFSSNRFVCSSI 127
P+ +A + GSG G ++P + P T PPP + L ++ ++ +
Sbjct: 128 PKKEEPSGSAGEEAQGSGDGPAKKPPVGPCTPPPPQTANPQHKSHLQYTEEPWILPEV 185
>AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD,
isoform D protein.
Length = 3912
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/58 (22%), Positives = 25/58 (43%)
Frame = -2
Query: 300 PRSRAADVAAPRRSCGSGRGTIREPRIVPSTAPPPSNVSLSSTIFLVFSSNRFVCSSI 127
P+ +A + GSG G ++P + P T PPP + L ++ ++ +
Sbjct: 128 PKKEEPSGSAGEEAQGSGDGPAKKPPVGPCTPPPPQTANPQHKSHLQYTEEPWILPEV 185
>AE014297-4314|AAF56853.1| 2977|Drosophila melanogaster CG11873-PA
protein.
Length = 2977
Score = 29.5 bits (63), Expect = 5.9
Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
Frame = -3
Query: 653 VPAKTTMAGQHXRQPEGEAS--AVAAHPVRENRADRLDGTEAGRRVRQAARPRLQHGPPR 480
VPA H P G A+ A A +++N R+ + +Q + + Q P+
Sbjct: 1901 VPANVVQPNNHSSTPAGAATSGATTAANIQQNITQRIHIYPMQHQQQQQQQQQQQQQQPQ 1960
Query: 479 LEPPRSXYSFAGAPFPPRAKLXTPPVIGSERLRLQVPGWRPGEQARRLEGDSAVSSDRP 303
+ + + P+ PP ++ +LQ+ +P E A R + S P
Sbjct: 1961 HQQQQPQHQLQQTGAKPKQAQPKPPPQQEQQSQLQI---KPKEPANRSKVTSQQLQQNP 2016
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 29.5 bits (63), Expect = 5.9
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = -3
Query: 440 PFPPRAKLXTPPVIGSERLRLQV-PGWRPGEQARRLEGDSAVSSDRPDRDRALRTSQRRD 264
P P + TPP + L + P P + R G+SA D + RT R
Sbjct: 18 PMPSASAAQTPPPNPNLTPNLNIRPSTNPIPRPRSTGGESAFQPAIIPVDYSYRTHTTRS 77
Query: 263 VLAGQGVAP 237
+L+ Q +AP
Sbjct: 78 ILSAQSMAP 86
>AY094820-1|AAM11173.1| 609|Drosophila melanogaster LD34893p
protein.
Length = 609
Score = 29.1 bits (62), Expect = 7.8
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRE 187
EL++EK K N+ ++ D T+ L + N+L +EE + + K + +L+E
Sbjct: 200 ELEEEKRKHENTTAQG-------DDITYGLELERNKLKQDLEEERAQVAKMEKDLKKLQE 252
Query: 188 TLE 196
TLE
Sbjct: 253 TLE 255
>AE013599-2637|AAF57737.2| 609|Drosophila melanogaster CG10915-PA
protein.
Length = 609
Score = 29.1 bits (62), Expect = 7.8
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRE 187
EL++EK K N+ ++ D T+ L + N+L +EE + + K + +L+E
Sbjct: 200 ELEEEKRKHENTTAQG-------DDITYGLELERNKLKQDLEEERAQVAKMEKDLKKLQE 252
Query: 188 TLE 196
TLE
Sbjct: 253 TLE 255
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,770,784
Number of Sequences: 53049
Number of extensions: 603824
Number of successful extensions: 3002
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2989
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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