Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N20
(832 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 37 0.014
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 34 0.10
At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam PF05... 33 0.31
At2g02790.1 68415.m00222 calmodulin-binding family protein very ... 33 0.31
At4g36980.1 68417.m05240 expressed protein 32 0.54
At4g18090.1 68417.m02691 hypothetical protein 29 2.9
At5g28430.1 68418.m03453 hypothetical protein 29 3.8
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 28 8.7
At5g33393.1 68418.m03983 hypothetical protein 28 8.7
At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related... 28 8.7
At4g02720.1 68417.m00368 expressed protein temporary automated f... 28 8.7
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 5 GELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLEN 160
GE +K+ SK N G ++ + D + NPDTNE TK E N L E+
Sbjct: 134 GEDQKDDSKSENGGGGDLDEKKDLKDNSDEENPDTNEKQTKPETEDNELGED 185
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 34.3 bits (75), Expect = 0.10
Identities = 27/65 (41%), Positives = 33/65 (50%)
Frame = +1
Query: 193 GRGWCGRWHYTGLPYGATP*PARTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPG 372
GRG+ R+ Y Y +P P R+ R RS R R RS SPSR R+ GR P
Sbjct: 680 GRGFSQRFSYARR-YRTSPSPDRSPYRFSDRSDRDRF-RSR-RRFSPSRFRSPLRGRTPP 736
Query: 373 TWRRR 387
+RRR
Sbjct: 737 RYRRR 741
>At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1097
Score = 32.7 bits (71), Expect = 0.31
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Frame = -1
Query: 343 AASKETVRYPRIALTA-IARCGRRSA----ATFLRVRAWHHTGAPYSAIDRTTPFQRFPK 179
++ ET+R ++ L + RC RR A +TF+ RA+H G +I+ + PF++F
Sbjct: 270 SSRSETMRKNQVHLVRMLVRCWRRFAKYKKSTFVLARAYHELGINEKSIE-SVPFEQFAI 328
Query: 178 LYHFFSVLQ 152
+ SV+Q
Sbjct: 329 QMNSVSVIQ 337
>At2g02790.1 68415.m00222 calmodulin-binding family protein very low
similarity to SP|P12036 Neurofilament triplet H protein
{Homo sapiens}; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 636
Score = 32.7 bits (71), Expect = 0.31
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Frame = +2
Query: 11 LKKEKSKERNSGSRE--VMRELSTSDTTFTLNPDTNELATKIE-EHTNLLLENTK---KM 172
L K + E + R+ EL T++ + E +I E+ N+ ENTK +
Sbjct: 427 LDKPEQDELRTAERDDKAEEELKTAERDDSAEEKIQEPDAQISSENGNVASENTKPSDRR 486
Query: 173 VELRETLEGGGAVDGTIRGSRMVPRPDPQERRGAATSAARDRGQGDPRI 319
L +E DG + R +P A++ AR RGQG PRI
Sbjct: 487 ASLPAKIENHHQDDGLTQSGRKIP----SYMAPTASAKARIRGQGSPRI 531
>At4g36980.1 68417.m05240 expressed protein
Length = 560
Score = 31.9 bits (69), Expect = 0.54
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +1
Query: 259 RTSRRCDVRSARSRSGRSEDTALSPSRRRACSPGRHPGTWRRRRSLP 399
R+ R RS RSR S + SPSR + SP RH R LP
Sbjct: 500 RSRSRSGSRSRRSRRHSSRSRSRSPSRSLSRSPKRHADALHLIRGLP 546
>At4g18090.1 68417.m02691 hypothetical protein
Length = 278
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +2
Query: 47 SREVMRELSTSDTTFTLNPDTN---ELATKIEEHTNLLLENTKKMVELRETLEGGGAVDG 217
SRE E SD ++P+++ + T IEE+ +LL+ EL L+G +
Sbjct: 6 SREDTNEAEESDWEKKMSPESSIFSSILTDIEENPTILLKQRNLSAELSTILDGSDEENP 65
Query: 218 TI 223
TI
Sbjct: 66 TI 67
>At5g28430.1 68418.m03453 hypothetical protein
Length = 486
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Frame = +2
Query: 11 LKKEKSKERNSGSREVMRELSTS----DTTFTLNPDTNELATKIEEHTN---LLLENTKK 169
LK+ S+ER EV R + T+ TF T E + + N + L +
Sbjct: 334 LKRMLSEERGLRDSEVARAVQTTRREVSETFIAKMKTAEHKVSLLDEVNDRFMYLSQARA 393
Query: 170 MVELRETLEGGGAVD 214
+L E LEGGG ++
Sbjct: 394 NAQLIEVLEGGGVLE 408
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/88 (18%), Positives = 34/88 (38%)
Frame = +2
Query: 8 ELKKEKSKERNSGSREVMRELSTSDTTFTLNPDTNELATKIEEHTNLLLENTKKMVELRE 187
+L+K S RN + R+ + + + + E + + +M++ +
Sbjct: 252 DLQKRMSVFRNKAVDKWQRKTQVTTGAAAIKGKLHAFNQNVSEQVASYMRDPSRMIKQMQ 311
Query: 188 TLEGGGAVDGTIRGSRMVPRPDPQERRG 271
AV GT+ M P P+ ++ G
Sbjct: 312 QSRSTVAVFGTVPQEAMEPNPEEKQEEG 339
>At5g33393.1 68418.m03983 hypothetical protein
Length = 435
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 92 TLNPDTNELATKIEEHTNLLLENTKKMVELRETLE 196
+L N+ A K EE T L E TKK+ ++TLE
Sbjct: 91 SLRTPINQQAIKEEEETKKLEEETKKLEVEKKTLE 125
>At4g14330.1 68417.m02207 phragmoplast-associated kinesin-related
protein 2 (PAKRP2) identical to cDNA
phragmoplast-associated kinesin-related protein 2
(PAKRP2) GI:16973450
Length = 869
Score = 27.9 bits (59), Expect = 8.7
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Frame = +2
Query: 14 KKEKSKERNSGSREV---------MRELSTSDTTFTLNPDTNELATKIEEHTNLL-LENT 163
KK+K KERN +++ +R L T N + E+ K+ E T LL E
Sbjct: 408 KKQKEKERNEAQKQLKKKEEEVAALRSLLTQREACATNEE--EIKEKVNERTQLLKSELD 465
Query: 164 KKMVELRETLE 196
KK+ E R E
Sbjct: 466 KKLEECRRMAE 476
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 27.9 bits (59), Expect = 8.7
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +2
Query: 14 KKEKSKERNSGSREVMRELSTSDTTFTLNPDTNELATKIEEHTNLLL--ENTKKMVELRE 187
+++KS + +S + + S SD+ T D+ + ++T L L E KK E+ E
Sbjct: 212 RRKKSSDSSSKRSKGEKTKSGSDSDGT-EEDSKMQVDETVKNTELELDEEELKKFKEMIE 270
Query: 188 TLEGGGAVDGTIRGSRMVPRPDPQERRGAATSAARDRGQGD 310
+ AVD + P P P+ + A G+GD
Sbjct: 271 LKKKSSAVDEEEEEGDVGPMPLPKAEGHISYGGALRPGEGD 311
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,908,963
Number of Sequences: 28952
Number of extensions: 264817
Number of successful extensions: 1174
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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