Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N18
(812 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 33 0.21
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 0.64
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 31 1.5
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 2.6
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 2.6
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 3.4
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 29 3.4
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 4.5
SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0) 29 4.5
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 5.9
SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3) 28 7.8
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 28 7.8
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP P SPP + PP PP PPPPP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP P PP PP PP PPPPP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP P PP PP PP PPPPP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP P PP PP PP PPPPP
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP P PP PP PP PPPPP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP P PP PP PP PPPPP
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP P P PP PP PP PPPPP
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP P P PP PP PP PPPPP
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 665 PPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP P PPGG P G P PPPPP
Sbjct: 954 PPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPP 991
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +2
Query: 665 PPXPXXKXXXSPPGGXKXPPXXFXXG--XPPXXXFPPPPP 778
PP P +PP G PP G PP PPPPP
Sbjct: 953 PPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPP 992
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 695 SPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
SPPGG PP G P PPPPP
Sbjct: 913 SPPGGSVPPPPPPPGGNAP---LPPPPP 937
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPP--GGXKXPPXXF--XXGXPPXXXFPPPPP 778
PP PP P PP GG PP PP PPPPP
Sbjct: 933 PPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPP 986
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 627 PPPKXKXXFXXXPPXXRXXKXXFPPPGGXKXPPXXXXXGXPXXXFFPPPP 776
PPP PP PPPGG PP G P PPPP
Sbjct: 934 PPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPP---GGGAPP---LPPPP 977
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +3
Query: 627 PPPKXKXXFXXXPPXXRXXKXXFPPPGGXKXPPXXXXXGXPXXXFFPPPP 776
PPP PP R + PP G PP P PPPP
Sbjct: 317 PPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPP 366
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP PP PP PP PPPP
Sbjct: 317 PPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPP 366
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 665 PPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP P P GG PP PP PPPPP
Sbjct: 346 PPPPSMGMAPPPVGGAAPPPPP-----PPPVGGPPPPP 378
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = +3
Query: 627 PPPKXKXXFXXXPPXXRXXKXXFPPPGGXKXPPXXXXXGXPXXXFFPPPP 776
PPP + PP PPP PP P PPP
Sbjct: 316 PPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPP 365
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 665 PPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPP 775
PP P PP PP PP +PPPP
Sbjct: 100 PPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPP 136
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPP 775
PP + P P PP PP PP +PPPP
Sbjct: 167 PPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPP 215
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 665 PPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPP 775
PP P PP PP PP +PPPP
Sbjct: 92 PPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPP 128
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/62 (24%), Positives = 17/62 (27%)
Frame = +3
Query: 588 PXXXXXPXFXXXXPPPKXKXXFXXXPPXXRXXKXXFPPPGGXKXPPXXXXXGXPXXXFFP 767
P P PPP P +PPP PP P + P
Sbjct: 176 PPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPPNAPNPPYPP 235
Query: 768 PP 773
PP
Sbjct: 236 PP 237
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP P PP PP G PP PPPPP
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPP----PPPPP 337
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 696 PPPGGXKXPPXXXXXGXPXXXFFPPPP 776
PPPGG PP P PPPP
Sbjct: 308 PPPGGAPPPPPPPPPPPPGDGGAPPPP 334
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 674 PXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPP 775
P + PP G PP F G PP PPPP
Sbjct: 477 PPPRGFPPPPFG---PPPPFYRGPPPPRGMPPPP 507
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 696 PPPGGXKXPPXXXXXGXPXXXFFPPPP 776
PPPGG + P P FPPPP
Sbjct: 460 PPPGGMRGMPPPPMGMYPPPRGFPPPP 486
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 658 KXPPXXAXKKXXFPPRGXXKXPXXFXXGGPPXXXFSPPPP 777
K P K PRG P F PP SPPPP
Sbjct: 104 KLRPAGERKAAGAGPRGPALKPPGFRTTAPPPKNSSPPPP 143
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 658 KXPPXXAXKKXXFPPRGXXKXPXXFXXGGPPXXXFSPPPP 777
K P K PRG P F PP SPPPP
Sbjct: 16 KLRPAGERKAAGAGPRGPALKPPGFRTTAPPPKNSSPPPP 55
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 665 PPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP P PP K PP PP PPPPP
Sbjct: 357 PPPPTNNTPPPPPPTNKPPPPPPPTNGPP----PPPPP 390
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP F PP P P PP PP PP PP
Sbjct: 297 PPAPPNLFIPSAPPNPHIPPAPPNPYIPTAPPNPSIPPAPPNPSIPPAPP 346
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 665 PPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP P P PP F PP PP PP
Sbjct: 282 PPNPSIPLAPPNPYIPPAPPNLFIPSAPPNPHIPPAPP 319
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 668 PXPXXKXXXSPPGGXKX-PPXXFXXGXPPXXXFPPPPP 778
P P + PPGG PP G PP +P PP
Sbjct: 228 PAPPPQGYAPPPGGYPGAPPAGGYPGAPPPGGYPGGPP 265
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 698 PPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP PP FPPPPP
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPPFPPPPP 493
>SB_24452| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1433
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +1
Query: 268 FDLTGTETKSNSVTVQS---LPNVSSIIKGYRDAYLVNL 375
F +TG E KS+S+T++ +P V ++ +G D +LV+L
Sbjct: 485 FTITGQEGKSDSITIRHADVIPRV-ALARGNEDVFLVHL 522
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 629 PPKKXXXFXXKXPPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP P P PP PP F PPPP
Sbjct: 1224 PPPMGHHMMNMPPPPPAMPPDGPPKFMGLPPPPPGMRPMPPQPPFMPPPP 1273
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 627 PPPKXKXXFXXXPPXXRXXKXXFPPPGGXKXPPXXXXXGXPXXXFFPPPP 776
PPP PP P G PP P F PPPP
Sbjct: 1224 PPPMGHHMMNMPPPPPAMPPDGPPKFMGLPPPPPGMRPMPPQPPFMPPPP 1273
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 665 PPXPXXKXXXSPPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP G PP G PP PPPPP
Sbjct: 264 PPMGMPGMGGMPPPGM--PPPMPPGGMPPNMEQPPPPP 299
>SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3)
Length = 474
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 417 WYFEXRXGRKNDSXKIDKIRVAVAFYDGGDVR**LHSDTVRFGFGASKIE 268
W+F G K DS + + + G V +HS VR G GA++ E
Sbjct: 288 WFFLSNTGAKIDSNNVQSLLRSFQRSTGVQVSKPIHSTAVRCGSGATEEE 337
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 698 PPGGXKXPPXXFXXGXPPXXXFPPPPP 778
PP PP F G PP PPPPP
Sbjct: 195 PPPPPPPPPPGFPGGAPP----PPPPP 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,465,883
Number of Sequences: 59808
Number of extensions: 323044
Number of successful extensions: 1218
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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