Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N17
(889 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 298 1e-79
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 81 5e-14
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 73 7e-12
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 63 8e-09
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 59 2e-07
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 55 2e-06
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 50 6e-05
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 49 1e-04
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 47 7e-04
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 47 7e-04
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 45 0.003
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 44 0.007
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 42 0.016
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 40 0.064
UniRef50_A6RDV3 Cluster: Predicted protein; n=1; Ajellomyces cap... 38 0.34
UniRef50_Q873I9 Cluster: Related to pirin; n=13; Ascomycota|Rep:... 37 0.79
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 37 0.79
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 36 1.8
UniRef50_A7T178 Cluster: Predicted protein; n=2; Nematostella ve... 35 3.2
UniRef50_O62543 Cluster: Serum response factor; n=1; Geodia cydo... 34 5.6
UniRef50_Q6CG59 Cluster: Yarrowia lipolytica chromosome B of str... 34 5.6
UniRef50_A2QU02 Cluster: Similarity: similarities correspond to ... 34 5.6
UniRef50_A7HDL4 Cluster: Polysaccharide deacetylase; n=3; Anaero... 33 7.4
UniRef50_Q9C105 Cluster: Chitinase; n=1; Schizosaccharomyces pom... 33 7.4
UniRef50_P12351 Cluster: Heme-responsive zinc finger transcripti... 33 7.4
UniRef50_Q4FWE6 Cluster: Putative uncharacterized protein; n=3; ... 33 9.7
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 298 bits (732), Expect = 1e-79
Identities = 164/238 (68%), Positives = 170/238 (71%)
Frame = +1
Query: 19 MEEIVPLXVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQXXXXXXXXXXXXXXXXXXX 198
MEEIVPL VSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQ
Sbjct: 1 MEEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAP 60
Query: 199 XXXXXXXXXXXXQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 378
QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE
Sbjct: 61 PPPLGSSLGRSPQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 120
Query: 379 AVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRL 558
AVVFPSAPSLKIPVTVDLCWTTADVTVEG NVLATPSS+RIT+GGLALMHQATLP
Sbjct: 121 AVVFPSAPSLKIPVTVDLCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLPCDLGY 180
Query: 559 HQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLKPPVVIRGSISVSHPLVTGHG 732
P + P P+ F + G+K VVIRGSISVSHPLVTGHG
Sbjct: 181 INPIIKSPIPYTNHPRLNIHFHQSA-DAVLEGVRAGVKASVVIRGSISVSHPLVTGHG 237
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 80.6 bits (190), Expect = 5e-14
Identities = 44/115 (38%), Positives = 64/115 (55%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ L++D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TV
Sbjct: 68 LPFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTV 127
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSI 591
DLCWT VT +L+ + RI G + LP + L + I DS+
Sbjct: 128 DLCWTIDSVTPARSEILSVFGAQRIAWGSVHFSAPILLP--AELSSLNPTIKDSV 180
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 73.3 bits (172), Expect = 7e-12
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 1/155 (0%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ +++DLT ET S+ + S P S+ Y A L +LE VFP PS P++
Sbjct: 71 LPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSF 130
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPWRSRLHQPDHQIPDSIHQPP 603
D W ++ V++ G +L+T +R+T GG + + LP R P + S + P
Sbjct: 131 DAHWHSSSVSITGSQILSTYGGTRVTFGGPITSSNPIILPADLRSTNPVVKDTVSYNNTP 190
Query: 604 QT*HPFPSIP*TPY*KEFAPGLKPPVVIRGSISVS 708
+ F P P + +VIRG + S
Sbjct: 191 KLTVAFHKNTDAPAVSVTTPVIYGSIVIRGVVRCS 225
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 63.3 bits (147), Expect = 8e-09
Identities = 38/117 (32%), Positives = 61/117 (52%)
Frame = +1
Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
+++PFQ DL G S +T+ S P ++ + YR A +V EAV+FP++ S K PV
Sbjct: 32 MVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNSTSSKNPV 90
Query: 421 TVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSI 591
DL W ++ + +L T +R T+GG +Q + + RL + I DS+
Sbjct: 91 HCDLIWVPSNSSASPKTILQTYGGNRFTVGGPITSNQ-IISFPLRLDSVNPIIKDSV 146
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 58.8 bits (136), Expect = 2e-07
Identities = 36/115 (31%), Positives = 58/115 (50%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ + D+ + + + ++S I YR A L L+A+V P+A S + P+T+
Sbjct: 1820 VPFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITL 1878
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSI 591
DL W+T +V + +L +R IGG L H T R+ L + I DS+
Sbjct: 1879 DLVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSH--TYELRADLSYLNPVIKDSV 1931
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ F L + S ++ + + P +++ + +R A L L AVV PSA S+ P+TV
Sbjct: 46 PFQ-FEFPLPAGQEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQ 104
Query: 430 LCWTTADVTVEGVNVLATPSSSRITIGG 513
L W A T +L T +I++GG
Sbjct: 105 LIWVPASSTTTSSQILGTYGGQQISVGG 132
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 50.4 bits (115), Expect = 6e-05
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ GT+ S+T+ ++ +VS++ YR A L +L + P+ + P TV
Sbjct: 34 PFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVG 92
Query: 430 LCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIH--QPP 603
+CW A+ V + T IGG A+ + L + L + ++ DSI P
Sbjct: 93 VCWVPANSPVTPAQITKTYGGQIFCIGG-AINTLSPLIVKCPLEMMNPRVKDSIQYLDSP 151
Query: 604 QT*HPFPSIP*TPY*KEFAPGLKPPVVIRGSISVSHPLVT 723
+ + P P P + + G++S+ PL+T
Sbjct: 152 KLLISITAQPTAP------PASTCIITVSGTLSMHSPLIT 185
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/96 (27%), Positives = 44/96 (45%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ + G+E K+ S + ++ ++ YR A L ++E V P A + P++V
Sbjct: 2034 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2093
Query: 430 LCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT 537
WT A ++ + + T+GG LM T
Sbjct: 2094 AVWTIASISPASASETSYYGGRLFTVGGPVLMSSTT 2129
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/89 (33%), Positives = 42/89 (47%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ L GT S+SV++ + VSS+ YR A L +L A + P+ S P TV
Sbjct: 37 LPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTV 95
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGG 513
L W + T ++L IGG
Sbjct: 96 SLVWVPFNSTATSSDILNVFGGQSFCIGG 124
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 7e-04
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +1
Query: 280 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 459
G + S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+
Sbjct: 44 GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPA 103
Query: 460 EGVNVLATPSSSRITIGG 513
++L S T GG
Sbjct: 104 SPTDILKIYGGSSYTFGG 121
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +1
Query: 304 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLAT 483
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 484 PSSSRITIGG 513
R IGG
Sbjct: 112 YGGQRFLIGG 121
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 43.6 bits (98), Expect = 0.007
Identities = 26/97 (26%), Positives = 40/97 (41%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ G K + + ++S + GYR A L++ E P A + P++V
Sbjct: 1908 VPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISV 1967
Query: 427 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT 537
WT A + L +T+GG LM T
Sbjct: 1968 TAVWTIASIAPATTTELQYYGGRLLTLGGPVLMGSVT 2004
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 42.3 bits (95), Expect = 0.016
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +1
Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
++ PFQ L G E ++ V++ + +++ YR A L +L+A++ P+ + P
Sbjct: 31 IVYPFQFTIASL-GVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPT 89
Query: 421 TVDLCWTTADVTVEGVNVLATPSSSRITIGG 513
+V L W + T +L +GG
Sbjct: 90 SVALAWVPYNSTATAAKILDVFGGQEFCVGG 120
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 40.3 bits (90), Expect = 0.064
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Frame = +1
Query: 241 LIIPFQRLYFDLT--GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+++PFQ F+ T GT + V++Q+ ++ + YR A +V +A++ P+ ++
Sbjct: 32 IVLPFQ---FEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSN 88
Query: 415 PVTVDLCWTTAD--VTVEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDS 588
P+TV L W A+ T + L +GG A+ T+ L + + DS
Sbjct: 89 PLTVYLAWVPANSPATPTQILKLRVYGGQSFVLGG-AISAAKTIEVPLNLDSVNRMLKDS 147
Query: 589 I 591
+
Sbjct: 148 V 148
>UniRef50_A6RDV3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 250
Score = 37.9 bits (84), Expect = 0.34
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 531 SHPPLAISATSTRSSNPRFHTPTTPDLTSISINPLN 638
+HPPL+ + T+T S+ RFH P+ P L+S + NP++
Sbjct: 17 AHPPLSTAKTTTLISSRRFHLPSLPSLSSFT-NPIS 51
>UniRef50_Q873I9 Cluster: Related to pirin; n=13; Ascomycota|Rep:
Related to pirin - Neurospora crassa
Length = 382
Score = 36.7 bits (81), Expect = 0.79
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 504 YWRSRPYASSHPPLAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKASGC 683
Y Y ++ P ISA+ST SSNP TTP ++S+ L + K A +A G
Sbjct: 41 YTNINTYFATQPSEDISASSTSSSNPTIVITTTPTAANMSVPRL--IRKIFLATEQAEGA 98
Query: 684 HQRLHQRISPPR 719
R+ + I P+
Sbjct: 99 GARVRRSIGTPQ 110
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 36.7 bits (81), Expect = 0.79
Identities = 23/89 (25%), Positives = 36/89 (40%)
Frame = +1
Query: 271 DLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTAD 450
DLT T T + + + A + A++ P+A +L +P DL T D
Sbjct: 515 DLTTTATDLTTTATDLTTTATDLTVPTVTALMETATALMVPTATALMVPTATDLTTTATD 574
Query: 451 VTVEGVNVLATPSSSRITIGGLALMHQAT 537
+T T + + +T ALM AT
Sbjct: 575 LTTTATATDLTTTVTDLTTTATALMETAT 603
Score = 33.9 bits (74), Expect = 5.6
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +1
Query: 295 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 474
+ + T ++P V+++++ + A++ P+A L +P DL T D+T +
Sbjct: 662 TTTATDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATAL 721
Query: 475 LATPSSSRITIGGLALMHQAT 537
+ T ++ + ALM AT
Sbjct: 722 METATALTVPT-ATALMETAT 741
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 35.5 bits (78), Expect = 1.8
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 325 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRI 501
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S SR+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_A7T178 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 235
Score = 34.7 bits (76), Expect = 3.2
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +3
Query: 522 YASSHPPLAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVR----AGVKASGCHQ 689
Y S PP TR +PR HTP+TP T I+ P +A V H
Sbjct: 168 YTPSTPPTYTHRVHTRLLHPRLHTPSTP--TPITPTPTHAEYTHAEYTHARRVHTRRVHP 225
Query: 690 RLHQRISP 713
RLH ++P
Sbjct: 226 RLHTPVTP 233
>UniRef50_O62543 Cluster: Serum response factor; n=1; Geodia
cydonium|Rep: Serum response factor - Geodia cydonium
(Sponge)
Length = 383
Score = 33.9 bits (74), Expect = 5.6
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 516 RPYASSHPPLAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRAGVKASGCHQRL 695
RP A + PPL + AT SS+P H PT P T + P +L G+ + + C
Sbjct: 244 RPRALT-PPLLL-ATPHHSSHPAHHGPTPPCRTRGAHPPRPCLLAGLSPCPRLAHCDGYG 301
Query: 696 HQRI---SPPRH 722
RI SPPRH
Sbjct: 302 GARITWSSPPRH 313
>UniRef50_Q6CG59 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 341
Score = 33.9 bits (74), Expect = 5.6
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 474 AGHPFILSHYYWRSRPYASSHPPLAISATSTRSSNPRF-HTPTTPDLTSISINPLNAVLK 650
A H + +YY+ SRP + S L SA ST S+P+ T+P L SI +P V
Sbjct: 47 AAHEYQQDNYYYSSRPQSKS---LNSSAPSTNHSSPQHSQVNTSPSLPSI-YDPNGPVAA 102
Query: 651 GVRAGVKASGCHQRLHQRISPPRHWA 728
+G SG + H + H A
Sbjct: 103 AYYSGPN-SGVNSANHSAVHSQAHSA 127
>UniRef50_A2QU02 Cluster: Similarity: similarities correspond to
multiple threonine and proline residues; n=2;
Aspergillus|Rep: Similarity: similarities correspond to
multiple threonine and proline residues - Aspergillus
niger
Length = 699
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 534 HPPLAISATSTRSSNPRFHTPTTPDL 611
HPP A TSTR+SNP HTP P L
Sbjct: 32 HPPKA--TTSTRTSNPAAHTPNQPPL 55
>UniRef50_A7HDL4 Cluster: Polysaccharide deacetylase; n=3;
Anaeromyxobacter|Rep: Polysaccharide deacetylase -
Anaeromyxobacter sp. Fw109-5
Length = 408
Score = 33.5 bits (73), Expect = 7.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 675 SGCHQRLHQRISPPRHWAWLXGVSPP 752
+GCH+ + +R+ PPRH+A+ G P
Sbjct: 272 AGCHEMIAERLGPPRHFAYPNGYYTP 297
>UniRef50_Q9C105 Cluster: Chitinase; n=1; Schizosaccharomyces
pombe|Rep: Chitinase - Schizosaccharomyces pombe
(Fission yeast)
Length = 1236
Score = 33.5 bits (73), Expect = 7.4
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 522 YASSHPPLAISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKGVRA 662
Y SS IS +ST N FH PT TS S A KGV +
Sbjct: 795 YLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSSSTTSLAANKGVNS 841
>UniRef50_P12351 Cluster: Heme-responsive zinc finger transcription
factor HAP1; n=3; Saccharomyces cerevisiae|Rep:
Heme-responsive zinc finger transcription factor HAP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1483
Score = 33.5 bits (73), Expect = 7.4
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 519 PYASSHPPLAISATSTRSSNPRFHTPTTPDLTSISINP 632
PY SS P +A S+ S +P HT TTP + S +P
Sbjct: 5 PYNSSVPSIASMTQSSVSRSPNMHTATTPGANTSSNSP 42
>UniRef50_Q4FWE6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 800
Score = 33.1 bits (72), Expect = 9.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 460 EGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQ 597
EG P+S + GGLA + A RLH+ H++P+ + Q
Sbjct: 611 EGRGSARRPASHEVAKGGLAALRDAASAKNGRLHRDPHRLPNRVLQ 656
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,748,928
Number of Sequences: 1657284
Number of extensions: 16651431
Number of successful extensions: 48345
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 45491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48272
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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