Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_N17
         (889 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,...    31   2.8  
AY061100-1|AAL28648.1|  521|Drosophila melanogaster LD08906p pro...    30   4.9  
AE014297-2753|AAF55737.1|  521|Drosophila melanogaster CG4936-PA...    30   4.9  
BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p pro...    29   8.6  
AY118624-1|AAM49993.1|  648|Drosophila melanogaster RE22492p pro...    29   8.6  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.6  
AE014297-435|AAF51890.3|  648|Drosophila melanogaster CG15598-PA...    29   8.6  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.6  
AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA...    29   8.6  

>AE014134-11|AAF51568.2| 2833|Drosophila melanogaster CG31973-PB,
            isoform B protein.
          Length = 2833

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
 Frame = +1

Query: 295  SNSVTVQSLPNVSSIIKGYRDAYLVNLE--AVVFPSAPSLKIPVTVDLCWTTADVTVEGV 468
            S  V   SLP + S I   +  YL N         S+ +   P T  +  T   + ++GV
Sbjct: 2196 SQFVNEYSLPELRSAIGEIKKLYLPNDRPATTTLKSSTTTLHPDTTPIA-TLFPIRIKGV 2254

Query: 469  NVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP 633
            +VL  PS + +T         +TL  R+    PD   P ++  PP +    P+IP
Sbjct: 2255 SVL--PSLNILTAN-------STLTERTTSSTPDFSTPRTLKTPPVSLTTVPTIP 2300


>AY061100-1|AAL28648.1|  521|Drosophila melanogaster LD08906p
           protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 513 SRPYASSHPPLAISATSTRSSNPRFHTPTTP 605
           +RPY  S+ P A +  STR+ + R HT   P
Sbjct: 413 NRPYKCSYCPAAFADLSTRNKHHRIHTNERP 443


>AE014297-2753|AAF55737.1|  521|Drosophila melanogaster CG4936-PA
           protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 513 SRPYASSHPPLAISATSTRSSNPRFHTPTTP 605
           +RPY  S+ P A +  STR+ + R HT   P
Sbjct: 413 NRPYKCSYCPAAFADLSTRNKHHRIHTNERP 443


>BT029039-1|ABJ16972.1| 1718|Drosophila melanogaster IP03621p protein.
          Length = 1718

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 483  PFILSHYYWRSRPYASSHPPLAISATSTRSSN 578
            P + SH Y     Y+SS  P  IS TS  SS+
Sbjct: 1140 PMLRSHSYQEEGSYSSSRRPSTISTTSITSSD 1171


>AY118624-1|AAM49993.1|  648|Drosophila melanogaster RE22492p
           protein.
          Length = 648

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +1

Query: 526 HQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLK 672
           H    PW S  H   H +P+ I+  P   HP   +   P  + + PG +
Sbjct: 381 HTVVPPWHSGEH---HSVPEIIYTHPPKGHPSAYLHGAPVHESYGPGFE 426


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014297-435|AAF51890.3|  648|Drosophila melanogaster CG15598-PA
           protein.
          Length = 648

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +1

Query: 526 HQATLPWRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*TPY*KEFAPGLK 672
           H    PW S  H   H +P+ I+  P   HP   +   P  + + PG +
Sbjct: 381 HTVVPPWHSGEH---HSVPEIIYTHPPKGHPSAYLHGAPVHESYGPGFE 426


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AE014134-1571|AAF52717.1| 1857|Drosophila melanogaster CG9487-PA
            protein.
          Length = 1857

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 483  PFILSHYYWRSRPYASSHPPLAISATSTRSSN 578
            P + SH Y     Y+SS  P  IS TS  SS+
Sbjct: 979  PMLRSHSYQEEGSYSSSRRPSTISTTSITSSD 1010


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,562,902
Number of Sequences: 53049
Number of extensions: 795981
Number of successful extensions: 2663
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2663
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)