Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N16
(922 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 60 3e-09
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 59 4e-09
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 58 1e-08
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 53 3e-07
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 2e-06
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 48 8e-06
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 1e-05
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 48 1e-05
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 3e-05
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 46 6e-05
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 43 3e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 40 0.002
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.007
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.011
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.026
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.026
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 36 0.046
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 33 0.32
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 33 0.43
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 33 0.43
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 31 0.99
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.3
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 31 1.7
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.3
SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019) 30 3.0
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 5.3
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 5.3
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 28 9.2
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 28 9.2
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 9.2
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 59.7 bits (138), Expect = 3e-09
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +1
Query: 250 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 414
W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 415 SWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
W+ ++T + + +P D +CT KFGS
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 210
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 59.3 bits (137), Expect = 4e-09
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRRA-NIRESESTVRILADLQMNWIDKRLS 270
++ LL Y +++ P + + + L + LR+ ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 271 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIXR 429
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 430 LDISTPISMQLDXWPNDMHTCTFKFGS 510
I + + + +P D+ +C FGS
Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFGS 181
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/88 (23%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRRA-NIRESESTVRILADLQMNWIDKRLS 270
+++ L Y +++ P D + + L + LR+ ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 271 WNAGEW-GCSTWLVSSERLWRPDVVLLN 351
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 58.0 bits (134), Expect = 1e-08
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +1
Query: 205 ESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG--D 375
E ++ L+ W D RL+WN E+G + S+ +W PD+ +LN+A +
Sbjct: 32 EKNEVIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVLNSANKDMDLRE 91
Query: 376 YALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+R +++ G V W+ L + T M + +P D C +FGS
Sbjct: 92 KNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGS 136
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 53.2 bits (122), Expect = 3e-07
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 396
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 397 SNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
S++GS +W+ I T + + +P D+ C KFGS
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGS 123
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 52.4 bits (120), Expect = 5e-07
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Frame = +1
Query: 217 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 387
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 388 ---ARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
V +NG V W+ + + + M + +P D C KF S
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFAS 135
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 52.0 bits (119), Expect = 7e-07
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Frame = +1
Query: 217 TVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGD---YA 381
TV L W D L+WN ++G + V +W PD+VL N + ++G+ +
Sbjct: 208 TVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSDSSGEMYKFT 267
Query: 382 LRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+ + ++G+V W+ + + + + + +P D C +FGS
Sbjct: 268 TKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGS 310
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 50.8 bits (116), Expect = 2e-06
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Frame = +1
Query: 181 HLRRANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 354
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 355 AATTAG---DYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
T AG Y S++G+ W ++ ++ + +P D C+ KFGS
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 49.2 bits (112), Expect = 5e-06
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 402
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 403 NGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
NG W +I + ++ + +P D C KFGS
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGS 159
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 48.4 bits (110), Expect = 8e-06
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +1
Query: 250 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 414
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 415 SWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
W+ + S+ ++++ +P D C+ KFGS
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGS 131
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +1
Query: 220 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YAL 384
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 385 RARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+S +GS +W + + + +P D TC KFGS
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGS 140
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
Frame = +1
Query: 223 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 375
+++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A +
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 376 ----YALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
Y + + +NG SW+ + + +P D CT +FGS
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGS 124
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 402
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 403 NGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+G+ +W+ +T + + +P D C KFGS
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGS 139
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +1
Query: 250 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 411
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 412 VSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
V WI + ++ ++++ WP D CT F S
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSS 496
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 46.0 bits (104), Expect = 4e-05
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 402
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 403 NGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+G+V W+ I + + + +P D C FGS
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGS 642
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 45.6 bits (103), Expect = 6e-05
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Frame = +1
Query: 241 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 399
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 400 NNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
N G W + + SM L WP D TC KFGS
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGS 219
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD---YALRARVSN 402
+ + W + L+W+ +G T + V R+WRPD++L N A T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 403 NGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+GS W+ + + + +P D +C KFGS
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGS 170
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Frame = +1
Query: 118 LLATYDRESPP----DSKIVVNLTLHLRRA-NIRESESTVRILADLQMNWIDKRLSWNAG 282
L TY+++ P D + V L L L + ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 283 EW-GCSTWLVSSERLWRPDVVLLNAA 357
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Frame = +1
Query: 241 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 405
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 406 GSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
G + W + T + + +P D TC FGS
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGS 182
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 244 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 357
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Frame = +1
Query: 250 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 408
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 409 SVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
V W+ ++ +++ WP D CT F S
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSS 95
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 38.7 bits (86), Expect = 0.007
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 405
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 406 GSVSWIXRLDISTPISMQLDXWPND 480
GS+ W + ++ + +P D
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFD 360
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.011
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 217 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 351
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 36.7 bits (81), Expect = 0.026
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 13/138 (9%)
Frame = +1
Query: 136 RESPPDS---KIVVNLTLHLRRANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 303
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 304 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIXRLDISTPISM 456
+ +++W+PD L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 457 QLDXWPNDMHTCTFKFGS 510
+ +P D +C S
Sbjct: 187 EFRNFPMDRQSCPVTISS 204
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 36.7 bits (81), Expect = 0.026
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 351
++MNW + L WNA E+G L +S +W PD+VL N
Sbjct: 84 VRMNWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 35.9 bits (79), Expect = 0.046
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +1
Query: 316 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCT 495
+++W+PD + N ++T + + G V + R+ + M L +P D +C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 496 FKFGS 510
F S
Sbjct: 86 ISFES 90
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 33.1 bits (72), Expect = 0.32
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 376 YALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+ + +VS+ G W+ ++T + + +P D +CT KFGS
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGS 57
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 32.7 bits (71), Expect = 0.43
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 394 VSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
V+N G V W + S+++ WP D+ C+ FGS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 32.7 bits (71), Expect = 0.43
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 394 VSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
V+N G V W + S+++ WP D+ C+ FGS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.5 bits (68), Expect = 0.99
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 157 KIVVNLTLHLRRANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 333
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 334 DVVLLN 351
D+VL N
Sbjct: 127 DIVLYN 132
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 31.5 bits (68), Expect = 0.99
Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRR-ANIRESESTVRILADLQMN 249
E A + + +D L ++ D+ P +VV + +++ I + +++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 250 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 414
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 415 SWIXRLDISTPISMQLDXWPNDMHTCTFKFGSRMPXTDXXVFR 543
R+ ++ M L +P D TC S TD + +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNLILK 201
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRRANIRESESTVRILADLQMNWIDKRLSWNA 279
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 280 GEWG-CSTWLVSSERLWRPDVVL 345
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 385 RARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+A V +NG W +I + + + +P D C KFGS
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGS 62
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 250 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 351
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019)
Length = 653
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 370 GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFG 507
G RA +++ G V IST + + +P D HTC + G
Sbjct: 332 GSLEFRAIITHEGLVKIFQPTSISTTCEVNIAFYPFDEHTCFIEIG 377
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 207 LTNVSTSQMQGQVDYDFGVGGRLPIVRCEERVDHE 103
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 298 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 408
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +1
Query: 349 NAAATTAGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
N A T + + ++ N+G W I + ++ + +P D C KFGS
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGS 58
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 238 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 351
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 322 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIXRLDISTPISMQLDXWPNDMHT 489
LW PD NA + + D + + ++ +GS+ + I M L +P D T
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 490 CTFKFGS 510
C FGS
Sbjct: 77 CNLVFGS 83
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 229 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 351
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 199 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAA 360
I E V + ++ NW D RL+ N + + E++WRPD NA A
Sbjct: 42 IEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTITFTRGDIEKVWRPDTYCSNAHA 94
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 316 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIXRLDISTPISMQLDXWPNDMH 486
+ +W P NA D + NG V + RL I+ + L +P+D+
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 487 TC 492
C
Sbjct: 92 VC 93
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 199 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAA 360
I E V + ++ NW D RL+ N + + E++WRPD NA A
Sbjct: 42 IEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTITFTRGDIEKVWRPDTYCSNAHA 94
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 322 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIXRLDISTPISMQLDXWPNDMHT 489
LW PD NA + + D + + ++ +GS+ + I M L +P D T
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 490 CTFKFGS 510
C FGS
Sbjct: 204 CNLVFGS 210
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 28.3 bits (60), Expect = 9.2
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRRANIRE-SESTVRILAD--LQMNW 252
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 253 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 351
D R N E + ++ W PD N
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,891,717
Number of Sequences: 59808
Number of extensions: 427978
Number of successful extensions: 1094
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2669453024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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