Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N16
(922 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 66 4e-13
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 59 5e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 59 5e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 58 8e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 58 1e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 57 3e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 56 5e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 55 8e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 1e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 6e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 1e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 36 4e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.011
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 30 0.034
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.42
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 9.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 66.1 bits (154), Expect = 4e-13
Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Frame = +1
Query: 61 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRRA---NIRESEST 219
I SA C + D LL+ Y+R P S +VV L L L + N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 220 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 393
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 394 VSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+ G V W + + + +P D TC KFGS
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.3 bits (142), Expect = 1e-11
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Frame = +1
Query: 79 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRR-------ANIRESESTVRILAD 237
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 411
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 412 VSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
V W + + ++ +P D TC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 60.5 bits (140), Expect = 2e-11
Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRRANIRESESTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIXRLDIST 444
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 445 PISMQLDXWPNDMHTCTFKFGS 510
+ ++ +P D TC KFGS
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 59.3 bits (137), Expect = 5e-11
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRR---ANIRES 210
+C +A + + D LL+ Y+R P ++ V + L L + N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 211 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 384
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 385 ---RARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+A + + G V W + + ++ +P D TC KFGS
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 59.3 bits (137), Expect = 5e-11
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Frame = +1
Query: 106 MIDSLLATYDRESPPDSKIVVNLT--LHLRRANIRESESTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIXRLD 435
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 436 ISTPISMQLDXWPNDMHTCTFKFGS 510
+ + ++ +P D +C KFGS
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 58.4 bits (135), Expect = 8e-11
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRRAN-IRESESTVRILADLQMNW 252
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 253 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 423
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 424 XRLDISTPISMQLDXWPNDMHTCTFKFGS 510
RL I M L+ +P D C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 58.4 bits (135), Expect = 8e-11
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +1
Query: 157 KIVVNLTL-HLRRANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 330
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 331 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTF 498
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 499 KFGS 510
KFGS
Sbjct: 168 KFGS 171
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.4 bits (135), Expect = 8e-11
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Frame = +1
Query: 106 MIDSLLATYDRESPP--DSKIVVNLTLHLRRANIRESESTVRILAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIXRLD 435
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 436 ISTPISMQLDXWPNDMHTCTFKFGS 510
+ S+ ++ +P D+ TC K GS
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.0 bits (134), Expect = 1e-10
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRRA-NIRESESTVRILADLQMNWIDKRLS 270
+++ LL++Y+ P + V + L++ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 271 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIXRLDIST 444
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 445 PISMQLDXWPNDMHTCTFKFGS 510
+ + +P D C KFGS
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.0 bits (134), Expect = 1e-10
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Frame = +1
Query: 106 MIDSLLATYDRESPP----DSKIVVNLTLHLRRA-NIRESESTVRILADLQMNWIDKRLS 270
+++ LL++Y+ P + V + L++ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 271 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIXRLDIST 444
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 445 PISMQLDXWPNDMHTCTFKFGS 510
+ + +P D C KFGS
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 56.8 bits (131), Expect = 3e-10
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
G Y V++NGS ++ + + + +P D C KFGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 56.0 bits (129), Expect = 5e-10
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
G Y V+++GS ++ + M + +P D C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
G Y V+++GS ++ + M + +P D C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 55.2 bits (127), Expect = 8e-10
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Frame = +1
Query: 58 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRRA-NIRESESTV 222
A+A++ + +++ LL TY+ E P ++ +V++ L L + ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 223 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 396
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 397 SNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
NNG+ ++ + + + +P D C KFGS
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 54.8 bits (126), Expect = 1e-09
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
G Y V+++GS ++ + + + +P D C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
G Y V+++GS ++ + + + +P D C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 196 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
G Y V+++GS ++ + + + +P D C KFGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 54.0 bits (124), Expect = 2e-09
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RRANIRESESTVRILADLQMN 249
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 250 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 417
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 418 WIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+ + + WP D H C FGS
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGS 189
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 51.6 bits (118), Expect = 1e-08
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +1
Query: 160 IVVNLTLHLRRANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 336
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 337 VVLLNAAATTAGDYALRAR--VSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
+L N A + VS+ G V W+ + + ++ +P D C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.6 bits (108), Expect = 2e-07
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = +1
Query: 94 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRRAN-IRESESTVRILADLQMNWID 258
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 259 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIXR 429
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 430 LDISTPISMQLDXWPNDMHTCTFKFGS 510
L I M+L +P D +C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.6 bits (103), Expect = 6e-07
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRRANIRESESTVRILADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 253 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 405
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 406 GSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
GS++ RL I+ M L +P D C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-06
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRRANIRESESTVRILADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 253 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 405
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 406 GSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
GS++ RL I+ M L +P D C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.9 bits (89), Expect = 3e-05
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Frame = +1
Query: 109 IDSLLATYDRESPPD---SKIVVNLTLHLRRAN-IRESESTVRILADLQMNWIDKRLSWN 276
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 277 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIXRLDISTP 447
E + +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 448 ISMQLDXWPNDMHTCTFKFGS 510
M L +P D CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 36.3 bits (80), Expect = 4e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRRANIRESESTVRILADLQM 246
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 247 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 417
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 418 WIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 36.3 bits (80), Expect = 4e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRRANIRESESTVRILADLQM 246
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 247 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 417
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 418 WIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 36.3 bits (80), Expect = 4e-04
Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLT-LHLRRANIRESESTVRILADLQM 246
E+ S ++D+LL + YD+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 247 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 417
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 418 WIXRLDISTPISMQLDXWPNDMHTCTFKFGS 510
++ R + +L+ +P D C+F S
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.5 bits (68), Expect = 0.011
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +1
Query: 160 IVVNLT-LHLRRANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 333
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 334 DV--VLLNAAATTAGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMHTCTFKFG 507
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 508 S 510
S
Sbjct: 257 S 257
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 29.9 bits (64), Expect = 0.034
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +1
Query: 316 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIXRLDISTPISMQLDXWPNDMH 486
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 487 TCTFKFGSRMPXTDXXVFR 543
C + S TD +F+
Sbjct: 176 ECKLQMESLSHTTDEMIFQ 194
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.42
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +1
Query: 316 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIXRLDISTPISMQLDXWPND 480
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 481 MHTC 492
+ C
Sbjct: 127 IQIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 9.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 303 PSAAAPFPCVPTQS 262
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,120
Number of Sequences: 438
Number of extensions: 3991
Number of successful extensions: 68
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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