Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N14
(833 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-08
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 46 3e-05
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.094
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 33 0.38
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 1.2
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 1.2
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 1.2
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 2.0
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 30 2.7
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 29 4.6
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 29 4.6
SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05) 28 8.1
SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.1
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 494
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG 207
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 55.2 bits (127), Expect = 6e-08
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 494
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG 192
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 55.2 bits (127), Expect = 6e-08
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 494
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG 75
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 54.8 bits (126), Expect = 8e-08
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +3
Query: 303 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 482
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 483 LMRG 494
RG
Sbjct: 257 NERG 260
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +3
Query: 378 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 494
A+F D ++ PGFA F AA EE HA +++L RG
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG 40
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 48.8 bits (111), Expect = 5e-06
Identities = 25/55 (45%), Positives = 31/55 (56%)
Frame = +3
Query: 303 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATK 467
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK 64
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHA 461
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 34.7 bits (76), Expect = 0.094
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 32.7 bits (71), Expect = 0.38
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 556 ESGASALEHALKLESDVTNSIREVIKTCESSFNDYHLVDYLS 681
ES A+ LEH L+ E++ N +R+ T SS N+Y V+YL+
Sbjct: 1823 ESKAADLEHRLETEANDKNKLRQENITLASSLNEYK-VNYLT 1863
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHA 461
+F D +N PGF K F A+ EE EHA
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHA 58
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2
Query: 269 RHHQG*VAHHGADLLQHDEETDPGGSG 349
RHHQ AHHG L+HD E D GSG
Sbjct: 811 RHHQH-GAHHG---LKHDTENDASGSG 833
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 441 TEEREHATKLIDYLLMRGKLTGSVTDLITYRGPRK 545
++ RE A + I L+ LTGS T++I RGP K
Sbjct: 1841 SDHREQAAQEIQAFLLDMILTGSKTEIIELRGPDK 1875
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTPSSWR 598
P HE G+ RP H G P GR H+P P R
Sbjct: 388 PPHEPGRPPHELGRPPHEPGRPPHEPGRLPHEPGRPPYEQR 428
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
P HE G+ RP H G P GR H+P P
Sbjct: 332 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPP 368
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
P HE G+ RP H G P GR H+P P
Sbjct: 339 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPP 375
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
P HE G+ RP H G P GR H+P P
Sbjct: 346 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPP 382
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
P HE G+ RP H G P GR H+P P
Sbjct: 360 PPHEPGRPPHEPGRPPHEPGRPPYEPGRPPHEPGRPP 396
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 452 RARDQAH*LPAHEGKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
R + +A P +G+ RP H G P GR H+P P
Sbjct: 310 RLQHEARIPPHDQGRPPYEPGRPPHEPGRPPHEPGRPPHEPGRPP 354
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTPSSWR 598
P HE G+ RP H G P GR H+P P R
Sbjct: 154 PPHEPGRPPHELGRPPHEPGRPPHEPGRLPHEPGRPPYEQR 194
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
P HE G+ RP H G P GR H+P P
Sbjct: 98 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPP 134
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
P HE G+ RP H G P GR H+P P
Sbjct: 105 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPP 141
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
P HE G+ RP H G P GR H+P P
Sbjct: 112 PPHEPGRPPHEPGRPPHEPGRPPHEPGRPPHEPGRPP 148
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +2
Query: 479 PAHE-GKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
P HE G+ RP H G P GR H+P P
Sbjct: 126 PPHEPGRPPHEPGRPPHEPGRPPYEPGRPPHEPGRPP 162
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +2
Query: 452 RARDQAH*LPAHEGKADRLRNRPHHVQGPPQTRRGRAAHQPSSTP 586
R + +A P +G+ RP H G P GR H+P P
Sbjct: 76 RLQHEARIPPHDQGRPPYEPGRPPHEPGRPPHEPGRPPHEPGRPP 120
>SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05)
Length = 1081
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 524 HVQGPPQTRRGRAAHQPSSTPSSWR 598
H+ P + +AAH+P+ TP WR
Sbjct: 636 HLAEPDKQAAEQAAHEPARTPRRWR 660
>SB_11863| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 921
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 9/77 (11%)
Frame = +1
Query: 535 APANTSWESGASALEHALKLE---SDVTNSIREVIKTCESSFN-----DYHLVDY-LSGG 687
A ANTS G +E L+ +D +I V K+C F D HL + LSG
Sbjct: 296 AEANTSPNEGTPKIESVFSLQLIPADKAENITYVCKSCGEQFKKKFLLDIHLRSHALSGE 355
Query: 688 IPRRTVQGPTRPXRQGL 738
+ T P G+
Sbjct: 356 VATSNAANTTMPSATGM 372
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 317 VVASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPH 189
V+A LL G+P+ P G D L + G+ E KE +PH
Sbjct: 252 VLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIKEMNPH 293
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,624,851
Number of Sequences: 59808
Number of extensions: 427650
Number of successful extensions: 1150
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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