Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N14
(833 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 52 4e-07
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 49 3e-06
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 47 1e-05
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 47 2e-05
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 40 0.002
At2g46900.1 68415.m05857 expressed protein contains Pfam profile... 30 1.6
At4g25520.1 68417.m03680 transcriptional co-regulator family pro... 29 5.0
At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PP... 29 5.0
At1g79060.1 68414.m09218 expressed protein 29 5.0
At5g46570.1 68418.m05734 protein kinase family protein contains ... 28 6.6
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei... 28 8.8
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei... 28 8.8
At3g63440.1 68416.m07143 FAD-binding domain-containing protein /... 28 8.8
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 8.8
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +3
Query: 309 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 488
C + +QI E S Y AM AYF D + G AK F +++ EEREHA KL++Y
Sbjct: 97 CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156
Query: 489 RG 494
RG
Sbjct: 157 RG 158
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +3
Query: 309 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 488
C + +QI E S Y A+ AYF D V G AK F +++ EEREHA L++Y
Sbjct: 95 CEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNK 154
Query: 489 RG 494
RG
Sbjct: 155 RG 156
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +3
Query: 330 QIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 494
QI E S Y A+ AYF D V GFAK F D++ EER HA ++Y RG
Sbjct: 96 QINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRG 150
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +3
Query: 318 MMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 494
++ +QI E S Y +M AYF D V G AK F +++ EER HA K ++Y RG
Sbjct: 97 VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRG 155
>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
hypothetical protein F9F8.14 - Arabidopsis thaliana,
EMBL:AC009991
Length = 355
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +3
Query: 333 IQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDY 479
I E S Y A+ AY D V GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345
>At2g46900.1 68415.m05857 expressed protein contains Pfam profile
PF04910: Protein of unknown function, DUF654
Length = 627
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 514 PTSSRTGAPANTSWESGASALEHALKLESDVTNSIREVI 630
PTSS P +TS +S + ALKL V N + E +
Sbjct: 411 PTSSSEATPRDTSKQSSLDLMTQALKLHPTVLNKLVEKV 449
>At4g25520.1 68417.m03680 transcriptional co-regulator family
protein contains similarity to GP|18033922|gb|AAL57277
SEUSS transcriptional co-regulator [Arabidopsis
thaliana]
Length = 748
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 406 APASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRTGAPANTS 552
A A +Y SML +NA P+S T G S Q P P S++ +P+++S
Sbjct: 558 AAALTNYQSMLMRQNAMNNPNSNTGKQEGFSSQNPTPNSNQ--SPSSSS 604
>At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PPA)
/ pyrophosphate phospho-hydrolase / PPase nearly
identical to SP|P21216 Soluble inorganic pyrophosphatase
(EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase)
{Arabidopsis thaliana}
Length = 218
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 290 PLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLNFSYNHRFFDDTQKN 141
P+I G+ D + C D KE PH + RFF+D +KN
Sbjct: 133 PMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPH-RLAEIRRFFEDYKKN 181
>At1g79060.1 68414.m09218 expressed protein
Length = 396
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 311 ASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLN 183
ASLL PL+ D D V++ S S S+ S E+ P L+
Sbjct: 175 ASLLMSLPLLKDSDSESVSISSSRMSLSSSSSGHDHEDLPRLS 217
>At5g46570.1 68418.m05734 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 489
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = -1
Query: 650 KLLSQVLM---TSRMLLVTSLSSL-RACSRADAPLSHDVFAGAPVRDEVG 513
++ S VLM + ++L T LS L +AC++ D HD+ RDE G
Sbjct: 315 EVASHVLMGLPKNTVILPTMLSPLGKACAKMDLATFHDILLKTGYRDEEG 364
>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 294
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 559 SGASALEHALKLESDVTNSIREVIKTCESSFN 654
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 369
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 559 SGASALEHALKLESDVTNSIREVIKTCESSFN 654
S S H LKL S T+++R + + SSFN
Sbjct: 37 SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68
>At3g63440.1 68416.m07143 FAD-binding domain-containing protein /
cytokinin oxidase family protein similar to cytokinin
oxidase, Zea mays, EMBL:ZMY18377 [gi:3882018]
[gi:3441978]
Length = 504
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 509 RNRPHHVQGPPQTRRGRAAHQPSSTPSSWRV 601
R R H +QG QTR G H S P +V
Sbjct: 92 RGRGHSLQGQAQTRHGIVIHMESLHPQKLQV 122
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 410 RLREAILRCCD*RTRARDQAH*LPAHEGKADRLRNRPHHVQGPPQTRR 553
RL EAI R T + D L HE + + + H G TR+
Sbjct: 368 RLEEAIERFNQKETESSDLVEKLKTHENQIEEYKKLAHEASGVADTRK 415
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,800,127
Number of Sequences: 28952
Number of extensions: 287931
Number of successful extensions: 744
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1921616800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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