BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_N11 (886 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_0456 + 29521282-29522064 32 0.70 06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 31 1.2 08_02_0600 - 19166283-19166851,19166988-19168839,19169347-191694... 30 2.8 03_04_0006 + 16257288-16259522 30 2.8 02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166... 30 2.8 06_03_0854 + 25400855-25403741,25406174-25407708 29 5.0 06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 29 5.0 04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437... 29 5.0 09_06_0258 + 21900685-21901927,21902571-21902710 29 6.6 06_01_0672 - 4903126-4903219,4903322-4903430,4903620-4905096,490... 29 6.6 06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 6.6 >01_06_0456 + 29521282-29522064 Length = 260 Score = 31.9 bits (69), Expect = 0.70 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%) Frame = -1 Query: 709 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 587 AW+C P +G+RG +RRR P S R R +T+RP + S A Sbjct: 12 AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58 >06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586, 8905437-8905690,8905785-8908799,8908889-8909001, 8909975-8910164,8910399-8910512,8910591-8910698, 8910941-8911073,8911206-8911408,8911626-8911826 Length = 1889 Score = 31.1 bits (67), Expect = 1.2 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 313 GSQMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSL 459 G+ PR + D EW N PT+ ++ + +PRE Q+ K + L Sbjct: 1393 GNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFIL 1441 >08_02_0600 - 19166283-19166851,19166988-19168839,19169347-19169415, 19171797-19171844,19173500-19173622 Length = 886 Score = 29.9 bits (64), Expect = 2.8 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = +2 Query: 32 PGPAFSGLPRIFLAV-RSCRFRFVRDRHDSVRPPFNG 139 P P ++GLPR F R C+ +D H V PP G Sbjct: 222 PPPPYTGLPRAFFGQHRGCKVTLYQDAH--VAPPLAG 256 >03_04_0006 + 16257288-16259522 Length = 744 Score = 29.9 bits (64), Expect = 2.8 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%) Frame = -1 Query: 520 AKRSP---TYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWE 368 A+RSP Y T L + ARL T PA SP +AV S + G W+ Sbjct: 162 ARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWD 215 >02_05_0110 + 25914110-25915006,25915726-25915797,25916411-25916699, 25916864-25916949,25917267-25917490,25917674-25917740, 25917830-25917889,25917995-25918078,25918475-25918555 Length = 619 Score = 29.9 bits (64), Expect = 2.8 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -1 Query: 337 LDDEAFGYL-KRVIVTPAVYPRLLEFLHVDIQSTG 236 LDDE YL R V + RLL+F++VD STG Sbjct: 279 LDDEDISYLTNRAAVYIEMGKRLLKFIYVDPSSTG 313 >06_03_0854 + 25400855-25403741,25406174-25407708 Length = 1473 Score = 29.1 bits (62), Expect = 5.0 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -1 Query: 520 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 395 AKR+PT T P AR +++ +F +P P P +V+S Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515 >06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958, 3104051-3104848,3104997-3105143,3106024-3106377 Length = 641 Score = 29.1 bits (62), Expect = 5.0 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 606 GRTVFRSKR--AEW*RGGNARRRLKLPRDPVRGHCQAGS*LGA 728 G+T+ R R A W RG A RR +LP G +AG LG+ Sbjct: 36 GQTLTRGPRTCAVWRRGRAAVRRRRLPAASAEGGAKAGRSLGS 78 >04_04_1105 - 30942735-30942791,30943116-30943466,30943670-30943762, 30943869-30944072,30944155-30944399,30945019-30945877, 30946070-30946936,30947113-30947562 Length = 1041 Score = 29.1 bits (62), Expect = 5.0 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Frame = -2 Query: 117 ESC-RSRTKRNRHDLTA--RKIRGRPENAGPGSSP 22 ESC R + ++ D+TA K RGR N PG+SP Sbjct: 906 ESCSRDKARKRSDDVTAMGEKRRGRMHNHEPGASP 940 >09_06_0258 + 21900685-21901927,21902571-21902710 Length = 460 Score = 28.7 bits (61), Expect = 6.6 Identities = 18/60 (30%), Positives = 26/60 (43%) Frame = -1 Query: 745 FFDRCTAPSQLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTAHRFRPTE 566 +FD C S + + P +G G+ KR FP + ++ V P L A R TE Sbjct: 396 YFDVCYTQSTIFRYSAPSSGLNGNLKRPGKFPMPYPR---KQQAVNEPFLPDAGRGLETE 452 >06_01_0672 - 4903126-4903219,4903322-4903430,4903620-4905096, 4906200-4906538 Length = 672 Score = 28.7 bits (61), Expect = 6.6 Identities = 30/116 (25%), Positives = 38/116 (32%) Frame = -1 Query: 736 RCTAPSQLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTAHRFRPTE*VM 557 R T PS A PR S RRRA PP+ R R P + A T Sbjct: 148 RTTTPSPAGAAASPRLSSSNPDARRRA-PPQPEPPSTPRKENRVPSAAAASTAAATATPR 206 Query: 556 KQ*K*WFFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLD 389 + S + S +P +P R P P+PV A + D Sbjct: 207 LRALSRSRSSLKESASSVRDSPRRAPPPPRRSHDGDAGDRPKQQPEPVHAATTTAD 262 >06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 Length = 640 Score = 28.7 bits (61), Expect = 6.6 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -2 Query: 642 TTLHAWNETPCARRYY 595 TT AW ETPCA R++ Sbjct: 560 TTTEAWVETPCAHRFH 575 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,618,078 Number of Sequences: 37544 Number of extensions: 544562 Number of successful extensions: 1642 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1583 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1640 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2503236492 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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