Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N11
(886 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protei... 29 6.5
M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein. 29 6.5
AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-P... 29 6.5
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P... 29 6.5
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P... 29 6.5
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P... 29 6.5
AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA ... 29 6.5
U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensit... 29 8.5
AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p pro... 29 8.5
AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p pro... 29 8.5
AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA... 29 8.5
>X17558-1|CAA35591.1| 1299|Drosophila melanogaster patched protein
protein.
Length = 1299
Score = 29.5 bits (63), Expect = 6.5
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Frame = -1
Query: 739 DRCTAPSQLPAWQCPRTGS----RGSFKRRRAFPPRHHSARLERNTVR-PPILSTAHRFR 575
DR + PS LP R+G +GS R + HH + N I ++
Sbjct: 1132 DRISTPSPLPVRSSKRSGKSYVVQGSRSSRGSCQKSHHHHHKDLNDPSLTTITEEPQSWK 1191
Query: 574 PTE*VMKQ*K*WFFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLA 404
+ ++ W + R +R +YA P + + A + P P P P A
Sbjct: 1192 SSNSSIQMPNDWTYQP-REQRPASYAAPPPAYHKAAAQQHHQHQGPPTTPPPPFPTA 1247
>M28999-1|AAA28696.1| 1286|Drosophila melanogaster patched protein.
Length = 1286
Score = 29.5 bits (63), Expect = 6.5
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Frame = -1
Query: 739 DRCTAPSQLPAWQCPRTGS----RGSFKRRRAFPPRHHSARLERNTVR-PPILSTAHRFR 575
DR + PS LP R+G +GS R + HH + N I ++
Sbjct: 1119 DRISTPSPLPVRSSKRSGKSYVVQGSRSSRGSCQKSHHHHHKDLNDPSLTTITEEPQSWK 1178
Query: 574 PTE*VMKQ*K*WFFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLA 404
+ ++ W + R +R +YA P + + A + P P P P A
Sbjct: 1179 SSNSSIQMPNDWTYQP-REQRPASYAAPPPAYHKAAAQQHHQHQGPPTTPPPPFPTA 1234
>AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-PE,
isoform E protein.
Length = 2403
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 142 LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 35
+TVE R + RI P E +P RP G E+P AGE G+
Sbjct: 1433 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469
>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
isoform D protein.
Length = 7210
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 142 LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 35
+TVE R + RI P E +P RP G E+P AGE G+
Sbjct: 6240 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276
>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
isoform C protein.
Length = 4463
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 142 LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 35
+TVE R + RI P E +P RP G E+P AGE G+
Sbjct: 1433 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 1469
>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
isoform A protein.
Length = 9270
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 142 LTVERR--SYRIVPIAHETKPTRPYG*EDPRKAGERGS 35
+TVE R + RI P E +P RP G E+P AGE G+
Sbjct: 6240 ITVEPRVRAPRISP-PREGRPPRPSGDEEPAAAGEEGA 6276
>AE013599-680|AAF59062.1| 1286|Drosophila melanogaster CG2411-PA
protein.
Length = 1286
Score = 29.5 bits (63), Expect = 6.5
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Frame = -1
Query: 739 DRCTAPSQLPAWQCPRTGS----RGSFKRRRAFPPRHHSARLERNTVR-PPILSTAHRFR 575
DR + PS LP R+G +GS R + HH + N I ++
Sbjct: 1119 DRISTPSPLPVRSSKRSGKSYVVQGSRSSRGSCQKSHHHHHKDLNDPSLTTITEEPQSWK 1178
Query: 574 PTE*VMKQ*K*WFFSDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLA 404
+ ++ W + R +R +YA P + + A + P P P P A
Sbjct: 1179 SSNSSIQMPNDWTYQP-REQRPASYAAPPPAYHKAAAQQHHQHQGPPTTPPPPFPTA 1234
>U04809-1|AAA19430.1| 622|Drosophila melanogaster cocaine-sensitive
serotonin transporterprotein.
Length = 622
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 617 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 513
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY071023-1|AAL48645.1| 622|Drosophila melanogaster RE10485p
protein.
Length = 622
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 617 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 513
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
>AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p
protein.
Length = 249
Score = 29.1 bits (62), Expect = 8.5
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -3
Query: 524 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 402
S+ TI CY ++S QCQ R+ +VFF S A C
Sbjct: 14 SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57
>AE013599-3863|AAF47200.1| 622|Drosophila melanogaster CG4545-PA
protein.
Length = 622
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 617 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 513
H PA + D PL P +NE + VV R+RET
Sbjct: 44 HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,763,762
Number of Sequences: 53049
Number of extensions: 861213
Number of successful extensions: 2590
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2590
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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