Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_N03
         (864 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   5.2  
AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding pr...    24   5.2  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    24   5.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   6.9  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   6.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.1  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 260 LVPEVPVKRRLLNPQPFRQFACRQTVYADLVQQV 159
           L  E+P ++RLL+ QP  ++ C    Y +L  QV
Sbjct: 506 LAGELPGQQRLLSRQPAPEYWC-SVAYFELDTQV 538


>AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding
           protein AgamOBP46 protein.
          Length = 202

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 64  ITDKLVDILCLSVIKCQA*QSCSRIQ*SVPPWTC*T 171
           I  K+  +LC S++   A  +C ++     P+TC T
Sbjct: 4   IVGKVFLVLCGSLLVTGAPNTCGKLDLKTDPFTCCT 39


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 64  ITDKLVDILCLSVIKCQA*QSCSRIQ*SVPPWTC*T 171
           I  K+  +LC S++   A  +C ++     P+TC T
Sbjct: 4   IVGKVFLVLCGSLLVTGAPNTCGKLDLKTDPFTCCT 39


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 449 TLERPRPAARAHGAIVLAVGEQRLPE 372
           T   P+P  R +G IVL +    LPE
Sbjct: 31  TAAAPQPVQRPYGKIVLTLENCLLPE 56


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 449 TLERPRPAARAHGAIVLAVGEQRLPE 372
           T   P+P  R +G IVL +    LPE
Sbjct: 31  TAAAPQPVQRPYGKIVLTLENCLLPE 56


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 594 PSQRSQASSFPSHDVV 547
           PS  S  SS+PS DVV
Sbjct: 870 PSSNSSPSSYPSPDVV 885


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 867,421
Number of Sequences: 2352
Number of extensions: 17615
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)