Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N02
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 253 1e-67
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.035
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.047
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 35 0.082
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 1.3
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 1.3
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 1.8
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 1.8
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 1.8
AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical ... 29 3.1
Z68315-6|CAA92671.1| 219|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 9.4
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 9.4
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 9.4
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 253 bits (619), Expect = 1e-67
Identities = 123/219 (56%), Positives = 155/219 (70%), Gaps = 5/219 (2%)
Frame = +3
Query: 66 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 245
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 246 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 425
AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 426 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAVPCNTKSSHSIGLMXVVVGT 605
LL++ DP DHQ +TEASYV +PVI+ NT+SPL+ +DI VPCN K SIGLM ++
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAR 180
Query: 606 *SVEASWCASP*PALGCXG*FV-----FYRDPXXSEKDE 707
+ S G + FYRDP +EK+E
Sbjct: 181 EILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETEKEE 219
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.035
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 245 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 367
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 245 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 367
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 245 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 367
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 245 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 367
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 245 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 367
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +2
Query: 242 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSCIP*T 421
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSCSSCQ 96
Query: 422 SSLDCIGPCTRPS 460
S+ C CT P+
Sbjct: 97 SA--CSSACTTPT 107
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 312 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 473
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 373 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 525
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 373 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 525
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 373 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 525
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 373 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 525
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical
protein Y32B12B.6 protein.
Length = 338
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 292 SSHHGPSVSVLY*SLPRTPVLRLLRDVSHQVLLLTRSKLHSVNLVS*LYWTLHKTI 459
S+HH V +L S P L++ + + + + R K H +N S Y TL T+
Sbjct: 100 SAHHMNRVFLLLNSYPENSNLKIEQMLREETSFVARQKYHEMNWDSWYYITLVSTV 155
>Z68315-6|CAA92671.1| 219|Caenorhabditis elegans Hypothetical
protein F28C6.5 protein.
Length = 219
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 673 KTNQPXHPSAGHGEAHHEASTLHVPTTTXIKPIEWED 563
+T +P +P A E + + T+H PT IE ED
Sbjct: 127 ETKKPENPFADVVETNEQLDTVHWPTAVSTSEIEGED 163
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +2
Query: 479 ICQHSCDCFVQHRLPTKICGHCCPM---QHQVFPLYWFDXGGC 598
+C+HS + K CGHC PM +HQ P + D G C
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED-GFC 383
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 125 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 301
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 302 TALRSACCTEV-CRAHRCYAYCGT 370
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 125 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 301
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 302 TALRSACCTEV-CRAHRCYAYCGT 370
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 125 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 301
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 302 TALRSACCTEV-CRAHRCYAYCGT 370
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,607,081
Number of Sequences: 27780
Number of extensions: 432709
Number of successful extensions: 1106
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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