Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N01
(855 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 260 4e-68
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 252 6e-66
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 199 8e-50
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 195 1e-48
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 184 3e-45
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 181 2e-44
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 181 2e-44
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 178 1e-43
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 171 1e-41
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 171 3e-41
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 169 8e-41
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 167 3e-40
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 163 4e-39
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 161 2e-38
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 161 2e-38
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 145 1e-33
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 130 4e-29
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 118 2e-25
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 116 1e-24
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 110 4e-23
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 91 4e-17
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 90 8e-17
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 89 2e-16
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 88 2e-16
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 87 5e-16
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 86 1e-15
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 77 8e-13
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 77 8e-13
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 76 1e-12
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 3e-12
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 69 1e-10
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 62 1e-08
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 62 2e-08
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 44 0.005
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 44 0.005
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.020
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 38 0.43
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.7
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.7
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 3.0
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 5.3
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 5.3
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 6.9
UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 9.2
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 9.2
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 260 bits (636), Expect = 4e-68
Identities = 121/179 (67%), Positives = 137/179 (76%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VFKAPIRPD+VN VH ++ KN+RQPY VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 27 VFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 86
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGAFGNMCRGGRMFAPTK WRRWH ++GH IE+
Sbjct: 87 SGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEE 146
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVR 719
+PELPLVV DKV+ KTK+AV+ L++LKAW+DI KVY SQR+RAGKGKMRNRRRI R
Sbjct: 147 VPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRR 205
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 252 bits (618), Expect = 6e-66
Identities = 118/179 (65%), Positives = 138/179 (77%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 30 VFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 89
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+I+
Sbjct: 90 SGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDG 149
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVR 719
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI+ R
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARR 208
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 199 bits (485), Expect = 8e-50
Identities = 98/177 (55%), Positives = 117/177 (66%), Gaps = 3/177 (1%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF +PIRPD+V VH M+KN RQPY VS++AGHQTSAESWGTGRAVARIPRV GGGTHR
Sbjct: 26 VFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQTSAESWGTGRAVARIPRVSGGGTHR 85
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQ AFGNMCR GRMFAPTK WR+WH ARGH I +
Sbjct: 86 AGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRFATVSALAASGVPALLFARGHQISE 145
Query: 543 IPELPLVVADKVQE---INKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
+ E+PLV+ +V E I +T A L+ + A D+ KV S++LRAGKGK+R RR
Sbjct: 146 VAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKDVEKVKDSRKLRAGKGKLRGRR 202
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 195 bits (476), Expect = 1e-48
Identities = 95/183 (51%), Positives = 118/183 (64%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF APIR D+V VH +M+KNSRQ Y V++ +G SA SWGTGRAVARIPR+ GGGT
Sbjct: 26 VFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNHSAHSWGTGRAVARIPRISGGGTST 85
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SG GAFGNMCRGGRMFAPTK +RRWH +RGH I
Sbjct: 86 SGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSVPSLVMSRGHQIGN 145
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVRA 722
+PE+PLVV D +Q KTK+A+ FL+ + A D+ +V S+ +RAG+GKMRNRR ++ R
Sbjct: 146 VPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREIRAGRGKMRNRRYVARRG 205
Query: 723 SYL 731
L
Sbjct: 206 PML 208
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 184 bits (447), Expect = 3e-45
Identities = 94/178 (52%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF +P+R DLV V +MSKN RQ Y VS +AGHQ SAESWGTGRAVARIPRV GT R
Sbjct: 28 VFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAGHQHSAESWGTGRAVARIPRVSASGTSR 87
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGAFGNMCRGG MF+P K +RR+H ARGH I
Sbjct: 88 SGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEKRHAVAAAIAATGCPSLVMARGHRINN 147
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRL-KAWSDILK-VYKSQRLRAGKGKMRNRRRI 710
+PELPLV+++++Q INKT AV F + K + +K + S +R GKGKMRNRRR+
Sbjct: 148 VPELPLVISNEIQNINKTSTAVEFFKNFGKGLEEEMKRIESSIAIRCGKGKMRNRRRV 205
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 181 bits (441), Expect = 2e-44
Identities = 86/174 (49%), Positives = 110/174 (63%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q SAESWGTGRAVARIPRV G GTHR
Sbjct: 28 VFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHSAESWGTGRAVARIPRVSGSGTHR 87
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQ AFGN CR GRM P K WRRWH ARGH I +
Sbjct: 88 SGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHAAATAVAATGIVPLVLARGHRISQ 147
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
+P++PLVV DK++ KT A+ FL+R A+ D+ KV ++ +RAG K R ++
Sbjct: 148 VPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKVVSTKVVRAGISKQRGKK 201
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 181 bits (441), Expect = 2e-44
Identities = 87/171 (50%), Positives = 110/171 (64%)
Frame = +3
Query: 192 APIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQ 371
+PIRPD+V+ VH++++KN RQP+ AGHQ SAESWGTGRAVAR+PR+ G GT R+GQ
Sbjct: 30 SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAESWGTGRAVARVPRISGSGTSRNGQ 89
Query: 372 GAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPE 551
AF N RGG M++P K WRRWH ARGH I+ +PE
Sbjct: 90 AAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMCSAIAASSNPSLVLARGHKIDNVPE 149
Query: 552 LPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
LPLVV+D V++I KTK+AV L LKA D+ +S+R+R G GK RNRR
Sbjct: 150 LPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRIRVGSGKARNRR 200
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 178 bits (434), Expect = 1e-43
Identities = 88/174 (50%), Positives = 109/174 (62%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF+ PIR DL+ + +MSKN R PY V AG++TSAESWGTGRAVARIPRV GGGTHR
Sbjct: 27 VFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAGYETSAESWGTGRAVARIPRVPGGGTHR 86
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQ AFGNMCRGG MF PTK WRRW ARGH I
Sbjct: 87 AGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKEKRYAVCSSIAASGITSLVLARGHRISN 146
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
+ E+PLV ++ ++ + KTK A+ FL L ++ ++ KS +LRA GKMRNR+
Sbjct: 147 LKEVPLVASNDIESMQKTKDALKFLISLGLRDEVNRLIKSXKLRARXGKMRNRK 200
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 171 bits (417), Expect = 1e-41
Identities = 85/182 (46%), Positives = 113/182 (62%), Gaps = 1/182 (0%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF AP+R DLV VH +MSKN RQ Y VSK +G+QTSA SWGTGRA+AR+PRV+GGGTHR
Sbjct: 26 VFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTSARSWGTGRAMARVPRVKGGGTHR 85
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQ A+ N CR G M+APT+ WRRWH +RGH IE
Sbjct: 86 AGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQALASALAATAVVPVVMSRGHRIEA 145
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK-SQRLRAGKGKMRNRRRISVR 719
+ E+P+VV D +++INKTK AV L + +++ ++ K + R R G+ K I +R
Sbjct: 146 LREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRIDKVTGRARDGRKKRPVGPLIILR 205
Query: 720 AS 725
A+
Sbjct: 206 AT 207
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 171 bits (415), Expect = 3e-41
Identities = 88/175 (50%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF APIR D+V+ V+ + SKN+RQP VS +AG Q SA SWGTGRAVARIPR+ G G+ R
Sbjct: 27 VFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQHSAISWGTGRAVARIPRISGSGSGR 86
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQGAFGNM R G MF+P K +R+W ARGH I
Sbjct: 87 NGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRFAVASCIAASAVPALVSARGHHIAG 146
Query: 543 IPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
+P++PLVV K + I KTKQAV L+++ A+SD+LKV S+ +RAG+GKMR R+
Sbjct: 147 VPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASKTVRAGQGKMRGRK 201
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 169 bits (411), Expect = 8e-41
Identities = 85/174 (48%), Positives = 103/174 (59%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF PIR DLV + +RQPY VSK AG Q SAESWGTGRA+AR+PRV+GGGT R
Sbjct: 24 VFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAESWGTGRAIARVPRVKGGGTRR 83
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQGAF N CR GRM PTK RRW +ARGH I
Sbjct: 84 AGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAMAVAASAQASLVEARGHRISD 143
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
+ LP++V+D + + KTK AV LR L ++ +V KS+ +R GKGKMRNRR
Sbjct: 144 VKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKSRGVRCGKGKMRNRR 197
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 167 bits (406), Expect = 3e-40
Identities = 78/171 (45%), Positives = 105/171 (61%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF P+R DLV+ VH +MSKN RQ Y +S+ +G+QTSA SWGTGRA++R PRV+GGGTHR
Sbjct: 26 VFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQTSARSWGTGRALSRTPRVKGGGTHR 85
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQ A+ N CR G MFAPT+ WR WH +RGH +E
Sbjct: 86 SGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKRLALAVSVAATASVPLVMSRGHRVES 145
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 695
+PELPLV+ D ++ + KT+ AV L + ++ +V ++R + KGK R
Sbjct: 146 VPELPLVLDDTMETLTKTRDAVELLNSMGLADELKRVSVTKRTKR-KGKKR 195
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 163 bits (397), Expect = 4e-39
Identities = 72/86 (83%), Positives = 78/86 (90%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 144 VFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWGTGRAVARIPRVRGGGTHR 203
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWH 440
SGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 204 SGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 161 bits (392), Expect = 2e-38
Identities = 80/174 (45%), Positives = 105/174 (60%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G GTHR
Sbjct: 22 VFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSGTHR 81
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGA N CRGGR+F PT WR+WH +RG+ ++
Sbjct: 82 SGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYRVKT 141
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR
Sbjct: 142 IPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGKMRNRR 194
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 161 bits (392), Expect = 2e-38
Identities = 79/158 (50%), Positives = 97/158 (61%), Gaps = 3/158 (1%)
Frame = +3
Query: 240 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 419
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 420 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 590
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 591 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
KT AV L+ + A +D K S++LRAGKGK+R RR
Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRR 179
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 145 bits (351), Expect = 1e-33
Identities = 69/171 (40%), Positives = 100/171 (58%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF PIR ++V +V+V+++KN++QP+ AG + SA SWGTGRA A +PRV G G++R
Sbjct: 24 VFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKKVSAISWGTGRAKACVPRVNGSGSNR 83
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+GQGA+ N CRGG F P RRW QARGH++ +
Sbjct: 84 NGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRKFAIASAIAATAVVPLVQARGHVLGE 143
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 695
+ E+P+VV D VQEI +T+ AV L+++ + D+ +V R+ KGK R
Sbjct: 144 VKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQRVLDGSVHRSSKGKFR 194
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 130 bits (314), Expect = 4e-29
Identities = 71/177 (40%), Positives = 93/177 (52%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF P+RPD++N VH + K R PY VS+ AG Q +A SWG GRAVAR+PR G
Sbjct: 23 VFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTAHSWGPGRAVARLPRKHG----- 77
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
G GA+ N RGG M PT RRW +ARGH I
Sbjct: 78 -GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAVASALAASANAALVEARGHRIAD 136
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIS 713
+P +PLVV + KTK A+ ++ + D+ + S+ +RAG+GKMRNRR I+
Sbjct: 137 VPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCKDSRHIRAGRGKMRNRRYIT 191
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 118 bits (284), Expect = 2e-25
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = +3
Query: 186 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRS 365
F+ P+R DL+ ++ N RQPY AG +TSAESWG G VA +PRV+G +
Sbjct: 22 FEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAESWGAGHGVAMVPRVKGRRHPAA 81
Query: 366 GQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
G+ A GG + APT P + W + RGH+I+
Sbjct: 82 GRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAALRSALAATAKPEFVKERGHVIDD 140
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVRA 722
+P LP+VV D+++ +NK ++ F + + W+D+ + ++R+RAGKGK R RR + ++
Sbjct: 141 VPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERAKSNRRIRAGKGKRRGRRYVKPKS 200
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 116 bits (278), Expect = 1e-24
Identities = 50/63 (79%), Positives = 61/63 (96%)
Frame = +3
Query: 522 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 702 RRI 710
RR+
Sbjct: 65 RRL 67
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 110 bits (265), Expect = 4e-23
Identities = 62/173 (35%), Positives = 85/173 (49%)
Frame = +3
Query: 186 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRS 365
F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G R
Sbjct: 48 FLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLWPR- 106
Query: 366 GQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKI 545
G F RGGR P K ++ H ARGH++EK+
Sbjct: 107 --GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVVEKV 164
Query: 546 PELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR
Sbjct: 165 PSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRR 217
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 90.6 bits (215), Expect = 4e-17
Identities = 48/174 (27%), Positives = 85/174 (48%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
+F+ RPD++ +SM QP+ AG +T+AES+G+GR A +PRV+G
Sbjct: 22 IFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAESFGSGRGAAMVPRVKG----- 76
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
S + AF GGR P + +H + RGH + +
Sbjct: 77 SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRSAIAATANKELVEQRGHQVSE 136
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
+ ++P V+ D+++ + TK+ + L DI++ K +++++GKGK+R R+
Sbjct: 137 LEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKGRKIKSGKGKLRGRK 190
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 89.8 bits (213), Expect = 8e-17
Identities = 52/174 (29%), Positives = 83/174 (47%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
+F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 28 IFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKN----- 82
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SG+ A GGR+ P ++ +ARGH+ +
Sbjct: 83 SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHVFKD 142
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+
Sbjct: 143 SVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRK 196
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 698
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 88.2 bits (209), Expect = 2e-16
Identities = 62/188 (32%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF +PIR D+VN VH ++KN + + + A PR G
Sbjct: 23 VFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPRPSPGAP-- 80
Query: 363 SGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXXXXXXXXXX 515
+ +CR AP K WRRWH
Sbjct: 81 VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIAASAVPSLL 140
Query: 516 QARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMR 695
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +R+GKGKMR
Sbjct: 141 LARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNVRSGKGKMR 200
Query: 696 NRRRISVR 719
NRR + R
Sbjct: 201 NRRYVQRR 208
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 87.0 bits (206), Expect = 5e-16
Identities = 41/133 (30%), Positives = 67/133 (50%)
Frame = +3
Query: 276 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 455
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 456 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 635
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 636 SDILKVYKSQRLR 674
SD K S R
Sbjct: 179 SDFKKAMISHAKR 191
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 85.8 bits (203), Expect = 1e-15
Identities = 51/183 (27%), Positives = 84/183 (45%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 21 VFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLGR--- 77
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
+ GGR P KP R+W + R H+ E
Sbjct: 78 --RAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHVFEG 135
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVRA 722
ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR + ++
Sbjct: 136 --ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVKKKS 193
Query: 723 SYL 731
L
Sbjct: 194 VLL 196
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 76.6 bits (180), Expect = 8e-13
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVARIPRVRGGGT 356
VF P R DL+ + + + QP AG SA+S TG ARI R++GGG
Sbjct: 21 VFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQARIARMKGGGG 80
Query: 357 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 536
R G+ RGGR P K + H RGHII
Sbjct: 81 RRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKSTVAGRGHII 140
Query: 537 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 701
+ I ELP+V++D ++ ++K + L L ++D+ ++ + ++ R GK +R R
Sbjct: 141 DGI-ELPIVISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGKSALRGR 193
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 76.6 bits (180), Expect = 8e-13
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
+F+ P+R DL+ +S QP AG +TSA S G GR VAR+PR++G
Sbjct: 34 IFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG----- 88
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
S + A NM RGGR P + + + RGH
Sbjct: 89 SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVRQRGHRF-S 147
Query: 543 IPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
LP+V+ V +I+ ++A L + + D+L+ + +R AGKGKMR RR
Sbjct: 148 AETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAKEGKRYNAGKGKMRGRR 202
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 75.8 bits (178), Expect = 1e-12
Identities = 49/174 (28%), Positives = 79/174 (45%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF +R D++ ++S + RQPY S AG + + G ++R+PR+ GG
Sbjct: 23 VFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHTTRPGLGISRMPRIAGGSRVV 82
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
A G G+ + + + + RGH ++
Sbjct: 83 GIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYSAIALTASVEAVKKRGHRFKE 137
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
+LP+VV D V+ INKTK A+ L+ L + DI + + + +RAG+GKMR RR
Sbjct: 138 GLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREGKHIRAGRGKMRGRR 191
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +3
Query: 207 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 353
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = +3
Query: 573 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVRAS 725
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR I R S
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQRRGS 148
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 698
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 699 RRRIS 713
RR IS
Sbjct: 62 RRYIS 66
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 62.5 bits (145), Expect = 1e-08
Identities = 47/174 (27%), Positives = 79/174 (45%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G R
Sbjct: 21 VFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGRARR 79
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
Q GR P K + RGH ++
Sbjct: 80 VPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDR 133
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
E+P+VV+D +++ KT++ V L L +DI + ++ +++AG+G R R+
Sbjct: 134 -DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADET-KIKAGQGSARGRK 185
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 62.1 bits (144), Expect = 2e-08
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Frame = +3
Query: 186 FKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVARIPRV 341
F IR D++ +++ + RQPY S AG Q SA SW T GR ++R+ R
Sbjct: 22 FNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISRVSRA 81
Query: 342 ---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXX 512
R G +G + P K + W+
Sbjct: 82 ILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATKELDL 140
Query: 513 XQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKM 692
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAGKGK
Sbjct: 141 VKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAGKGKR 196
Query: 693 RNRRRI 710
R R I
Sbjct: 197 RGRAYI 202
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 44.4 bits (100), Expect = 0.004
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +2
Query: 350 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG*RT 529
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVA 191
Query: 530 HY*KDSRA--SLGCSRQSPRDQQDQTGCHLPEAPQGMV*YP*GVQVSASSCW*G*NAQP 700
RA + G P ++D+ G +PE + +++ CW +AQP
Sbjct: 192 RPPDRQRAGGAAGGGGLDPGLREDEGGYGVPEGDRCDRRREPRERLARDPCWPRQDAQP 250
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 564 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 704
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKK 47
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 44.0 bits (99), Expect = 0.005
Identities = 49/196 (25%), Positives = 72/196 (36%), Gaps = 22/196 (11%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESWGTGRAVARIPRV 341
VF IR DL+ ++ N RQ Y + +AG + S E WG GR V+RI R
Sbjct: 53 VFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWWGKGRGVSRIMRK 112
Query: 342 RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQA 521
G T A RGGR K + W
Sbjct: 113 AGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSAIAASASSNLVSE 167
Query: 522 RGHIIEKIPELPLVV---------ADKVQEIN------KTKQAVIFLRRLKAWSDILKVY 656
RGH E P+++ D+ ++ T++ V + L +D+ +
Sbjct: 168 RGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMMEGLGLGADLDRAR 227
Query: 657 KSQRLRAGKGKMRNRR 704
+ +RAGKG MR R+
Sbjct: 228 TGRTIRAGKGTMRGRK 243
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.020
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 519 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 650
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 37.5 bits (83), Expect = 0.43
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +2
Query: 311 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 475
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 476 GGSRCCYRRPSARS 517
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 324 ARIPRVRGGGTHRSGQGAFGNMCRGG 401
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 408 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 274
TY+ H Y +HP T+ YHH H + ++ Q+P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
Score = 33.9 bits (74), Expect = 5.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 384 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 274
Y +HP T+ YHH R H Q P I H + P
Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQHP 111
Score = 33.1 bits (72), Expect = 9.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -1
Query: 408 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 271
T + +++HP T+ YHH H + ++ Q+P + H + Q P
Sbjct: 3 TPTSYSQLFQQHPQVTHHYHHQ-HPQVTHRYHQHPQVTHRYQYQHP 47
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 3.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 396 HDTCYRRHPDRTYEYHHHGHAEFGRQH 316
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 405 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 292
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 294 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 404
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 6.9
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 381 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 286
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida W619|Rep: Putative uncharacterized
protein - Pseudomonas putida W619
Length = 852
Score = 33.5 bits (73), Expect = 6.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 424 PGGVGTVASTSDSGERPWRQPLLLPASQRSFRLEDTLLKRFPSFP 558
P V +V SD G WRQ L + + FRL LK P+ P
Sbjct: 321 PAFVSSVVKVSDRGPYTWRQALAISDAALKFRLNIGKLKASPALP 365
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 33.1 bits (72), Expect = 9.2
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -1
Query: 414 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 277
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 9.2
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 399 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 268
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,805,873
Number of Sequences: 1657284
Number of extensions: 14536995
Number of successful extensions: 47242
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 43629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46730
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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