Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_N01
(855 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 252 3e-67
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 252 3e-67
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 252 3e-67
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 252 3e-67
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 173 2e-43
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 31 2.0
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 31 2.0
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 31 2.0
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 31 2.0
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 31 2.0
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 31 2.0
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 31 2.0
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 31 2.0
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 31 2.0
BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p pro... 31 2.7
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 2.7
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 2.7
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 2.7
AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA... 31 2.7
DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856 pro... 30 3.5
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 252 bits (618), Expect = 3e-67
Identities = 118/179 (65%), Positives = 138/179 (77%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 30 VFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 89
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+I+
Sbjct: 90 SGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDG 149
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVR 719
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI+ R
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARR 208
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 252 bits (618), Expect = 3e-67
Identities = 118/179 (65%), Positives = 138/179 (77%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 30 VFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 89
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+I+
Sbjct: 90 SGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDG 149
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVR 719
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI+ R
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARR 208
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 252 bits (618), Expect = 3e-67
Identities = 118/179 (65%), Positives = 138/179 (77%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 30 VFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 89
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+I+
Sbjct: 90 SGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDG 149
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVR 719
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI+ R
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARR 208
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 252 bits (618), Expect = 3e-67
Identities = 118/179 (65%), Positives = 138/179 (77%)
Frame = +3
Query: 183 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 362
VFKAPIRPD+VN+VH + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRGGGTHR
Sbjct: 30 VFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHR 89
Query: 363 SGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEK 542
SGQGAFGNMCRGGRMFAPTK +RRWH Q++GH+I+
Sbjct: 90 SGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDG 149
Query: 543 IPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRISVR 719
+ E PLVV+D+VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+RRRI+ R
Sbjct: 150 VSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIARR 208
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 173 bits (422), Expect = 2e-43
Identities = 80/123 (65%), Positives = 91/123 (73%)
Frame = +3
Query: 282 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 461
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 462 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 641
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W+D
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 120
Query: 642 ILK 650
I K
Sbjct: 121 IQK 123
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -1
Query: 402 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 271
+ TC R P + H H H H +P H G+QPP
Sbjct: 1010 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 1052
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -1
Query: 402 VHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 271
+ TC R P + H H H H +P H G+QPP
Sbjct: 209 IRRTTCRYRSPSSRHP-HQHQHHPHPHPHPHHPHQLHGMGEQPP 251
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +3
Query: 201 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 380
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 381 GNMCRGGRM 407
G GG M
Sbjct: 295 GG--AGGLM 301
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +3
Query: 201 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 380
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 381 GNMCRGGRM 407
G GG M
Sbjct: 295 GG--AGGLM 301
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +3
Query: 201 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 380
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 381 GNMCRGGRM 407
G GG M
Sbjct: 748 GG--AGGLM 754
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +3
Query: 201 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 380
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 381 GNMCRGGRM 407
G GG M
Sbjct: 748 GG--AGGLM 754
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +3
Query: 201 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 380
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 688 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 747
Query: 381 GNMCRGGRM 407
G GG M
Sbjct: 748 GG--AGGLM 754
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +3
Query: 201 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 380
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 381 GNMCRGGRM 407
G GG M
Sbjct: 295 GG--AGGLM 301
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 31.1 bits (67), Expect = 2.0
Identities = 22/69 (31%), Positives = 27/69 (39%)
Frame = +3
Query: 201 RPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 380
RP +D K+ P A T + S GTG A + GG +GQGA
Sbjct: 235 RPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPATSSAAGGAGGAAAAAGQGAA 294
Query: 381 GNMCRGGRM 407
G GG M
Sbjct: 295 GG--AGGLM 301
>BT010242-1|AAQ23560.1| 498|Drosophila melanogaster RE48016p
protein.
Length = 498
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 611 DDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDAGSSN-GCRQGRSPLSEVDATVP 435
D+ L GL+ + N K +LF S ++R N GC +PL + V
Sbjct: 392 DELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVA 451
Query: 434 TPPG 423
TPPG
Sbjct: 452 TPPG 455
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 314 TCCRP-NSACPWWWYS*VRSGC 376
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 314 TCCRP-NSACPWWWYS*VRSGC 376
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 2.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 314 TCCRP-NSACPWWWYS*VRSGC 376
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE013599-2858|AAF57577.1| 537|Drosophila melanogaster CG9811-PA
protein.
Length = 537
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 611 DDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDAGSSN-GCRQGRSPLSEVDATVP 435
D+ L GL+ + N K +LF S ++R N GC +PL + V
Sbjct: 431 DELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVA 490
Query: 434 TPPG 423
TPPG
Sbjct: 491 TPPG 494
>DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856
protein.
Length = 265
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 569 GYNQGKLGNLFNNVSSSLNERWDAGSSNGCRQGR 468
GYN+G+ GN +N +++ N + G G QGR
Sbjct: 200 GYNRGRNGNNYNRGNNNSNNYNNRGGRRGRNQGR 233
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,995,416
Number of Sequences: 53049
Number of extensions: 701737
Number of successful extensions: 3922
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3777
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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