BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_M23 (887 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 35 0.34 AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 35 0.34 AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 35 0.34 AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 35 0.34 AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 32 2.4 AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 32 2.4 AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 32 2.4 X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.2 S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.2 D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.2 AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.2 AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.2 AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.2 AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.2 AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.2 AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 31 4.2 U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ p... 31 7.4 D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding p... 31 7.4 AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2,... 31 7.4 AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2,... 31 7.4 AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2,... 31 7.4 AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2,... 31 7.4 AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger p... 31 7.4 AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 30 9.8 >AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and TIR domain containing protein-B protein. Length = 546 Score = 35.1 bits (77), Expect = 0.34 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 1/114 (0%) Frame = +2 Query: 386 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565 V P A S +P T T+ + VE A P S + I + PC + Sbjct: 139 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 193 Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP-SAYLTPSSL 724 P+ S P P P P TP E +P PP S P SA+LTPSSL Sbjct: 194 PLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 242 >AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating protein protein. Length = 712 Score = 35.1 bits (77), Expect = 0.34 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 1/114 (0%) Frame = +2 Query: 386 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565 V P A S +P T T+ + VE A P S + I + PC + Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332 Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP-SAYLTPSSL 724 P+ S P P P P TP E +P PP S P SA+LTPSSL Sbjct: 333 PLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381 >AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing adaptor inducing interferon-beta protein. Length = 712 Score = 35.1 bits (77), Expect = 0.34 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 1/114 (0%) Frame = +2 Query: 386 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565 V P A S +P T T+ + VE A P S + I + PC + Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332 Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP-SAYLTPSSL 724 P+ S P P P P TP E +P PP S P SA+LTPSSL Sbjct: 333 PLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381 >AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. Length = 712 Score = 35.1 bits (77), Expect = 0.34 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 1/114 (0%) Frame = +2 Query: 386 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565 V P A S +P T T+ + VE A P S + I + PC + Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332 Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP-SAYLTPSSL 724 P+ S P P P P TP E +P PP S P SA+LTPSSL Sbjct: 333 PLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381 >AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental retardation protein interacting protein 1 protein. Length = 495 Score = 32.3 bits (70), Expect = 2.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 581 PNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP 697 P+S QPP P P P+ + PG +PP +++P Sbjct: 61 PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98 >AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental retardation protein interacting protein 1 protein. Length = 495 Score = 32.3 bits (70), Expect = 2.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 581 PNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP 697 P+S QPP P P P+ + PG +PP +++P Sbjct: 61 PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98 >AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting protein 1 protein. Length = 495 Score = 32.3 bits (70), Expect = 2.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 581 PNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP 697 P+S QPP P P P+ + PG +PP +++P Sbjct: 61 PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98 >X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. Length = 443 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415 + +L DL TE + + T SLP++S+ ++GY Y + V P +K+ Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86 >S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. Length = 684 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415 + +L DL TE + + T SLP++S+ ++GY Y + V P +K+ Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144 >D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan receptor protein. Length = 626 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415 + +L DL TE + + T SLP++S+ ++GY Y + V P +K+ Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86 >AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily 4, group A, member 3 protein. Length = 443 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415 + +L DL TE + + T SLP++S+ ++GY Y + V P +K+ Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86 >AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily 4, group A, member 3 protein. Length = 626 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415 + +L DL TE + + T SLP++S+ ++GY Y + V P +K+ Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86 >AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily 4, group A, member 3 protein. Length = 637 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415 + +L DL TE + + T SLP++S+ ++GY Y + V P +K+ Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97 >AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily 4, group A, member 3 protein. Length = 626 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415 + +L DL TE + + T SLP++S+ ++GY Y + V P +K+ Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86 >AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily 4, group A, member 3 protein. Length = 637 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415 + +L DL TE + + T SLP++S+ ++GY Y + V P +K+ Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97 >AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. Length = 416 Score = 31.5 bits (68), Expect = 4.2 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = +2 Query: 515 LALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEA 694 L ++ PC + P+ S P P P P TP E +P PP S Sbjct: 20 LPILEPVKNPCSVKDQTPLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSST 74 Query: 695 P-SAYLTPSSL 724 P SA+LTPSSL Sbjct: 75 PCSAHLTPSSL 85 >U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ protein. Length = 1719 Score = 30.7 bits (66), Expect = 7.4 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%) Frame = +2 Query: 308 TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481 TV+S P+V + L + L ++ P+ PS P L T + L Sbjct: 938 TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 997 Query: 482 TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661 PSSS A H PC N +SP I P + P P P P + Sbjct: 998 APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 1046 Query: 662 PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751 PG PP S + S+ + SS + S+P Sbjct: 1047 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 1074 >D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding protein protein. Length = 1482 Score = 30.7 bits (66), Expect = 7.4 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%) Frame = +2 Query: 308 TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481 TV+S P+V + L + L ++ P+ PS P L T + L Sbjct: 737 TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 796 Query: 482 TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661 PSSS A H PC N +SP I P + P P P P + Sbjct: 797 APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 845 Query: 662 PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751 PG PP S + S+ + SS + S+P Sbjct: 846 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 873 >AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2, with ZNF domain protein. Length = 1718 Score = 30.7 bits (66), Expect = 7.4 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%) Frame = +2 Query: 308 TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481 TV+S P+V + L + L ++ P+ PS P L T + L Sbjct: 937 TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 996 Query: 482 TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661 PSSS A H PC N +SP I P + P P P P + Sbjct: 997 APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 1045 Query: 662 PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751 PG PP S + S+ + SS + S+P Sbjct: 1046 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 1073 >AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2, with ZNF domain protein. Length = 1540 Score = 30.7 bits (66), Expect = 7.4 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%) Frame = +2 Query: 308 TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481 TV+S P+V + L + L ++ P+ PS P L T + L Sbjct: 795 TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 854 Query: 482 TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661 PSSS A H PC N +SP I P + P P P P + Sbjct: 855 APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 903 Query: 662 PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751 PG PP S + S+ + SS + S+P Sbjct: 904 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 931 >AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2, with ZNF domain protein. Length = 1481 Score = 30.7 bits (66), Expect = 7.4 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%) Frame = +2 Query: 308 TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481 TV+S P+V + L + L ++ P+ PS P L T + L Sbjct: 736 TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 795 Query: 482 TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661 PSSS A H PC N +SP I P + P P P P + Sbjct: 796 APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 844 Query: 662 PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751 PG PP S + S+ + SS + S+P Sbjct: 845 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 872 >AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2, with ZNF domain protein. Length = 1718 Score = 30.7 bits (66), Expect = 7.4 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%) Frame = +2 Query: 308 TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481 TV+S P+V + L + L ++ P+ PS P L T + L Sbjct: 937 TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 996 Query: 482 TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661 PSSS A H PC N +SP I P + P P P P + Sbjct: 997 APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 1045 Query: 662 PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751 PG PP S + S+ + SS + S+P Sbjct: 1046 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 1073 >AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger protein 2 variant protein. Length = 1576 Score = 30.7 bits (66), Expect = 7.4 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%) Frame = +2 Query: 308 TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481 TV+S P+V + L + L ++ P+ PS P L T + L Sbjct: 795 TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 854 Query: 482 TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661 PSSS A H PC N +SP I P + P P P P + Sbjct: 855 APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 903 Query: 662 PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751 PG PP S + S+ + SS + S+P Sbjct: 904 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 931 >AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens cDNA FLJ30019 fis, clone 3NB692000545. ). Length = 262 Score = 30.3 bits (65), Expect = 9.8 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +2 Query: 596 QPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSL 724 +PP + PFP +P +P FAP ++PP +AP + P L Sbjct: 85 RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 125,631,183 Number of Sequences: 237096 Number of extensions: 2826129 Number of successful extensions: 7159 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 6683 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7146 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 11381686510 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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