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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_M23
         (887 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492646-1|AAO85488.1|  546|Homo sapiens proline rich, vinculin ...    35   0.34 
AB097023-1|BAC77376.1|  712|Homo sapiens putative NFkB activatin...    35   0.34 
AB093555-1|BAC44839.1|  712|Homo sapiens TIR domain containing a...    35   0.34 
AB086380-1|BAC55579.1|  712|Homo sapiens TICAM-1 protein.              35   0.34 
AL359706-1|CAI12865.1|  495|Homo sapiens nuclear fragile X menta...    32   2.4  
AL354816-1|CAC40689.2|  495|Homo sapiens nuclear fragile X menta...    32   2.4  
AF159548-1|AAF15315.1|  495|Homo sapiens nuclear FMRP interactin...    32   2.4  
X89894-1|CAA61984.1|  443|Homo sapiens nuclear receptor protein.       31   4.2  
S81243-1|AAB36006.1|  684|Homo sapiens CHN protein.                    31   4.2  
D78579-1|BAA11419.1|  626|Homo sapiens neuron derived orphan rec...    31   4.2  
AL359710-3|CAI95139.1|  443|Homo sapiens nuclear receptor subfam...    31   4.2  
AL359710-2|CAI95138.1|  626|Homo sapiens nuclear receptor subfam...    31   4.2  
AL359710-1|CAM16648.1|  637|Homo sapiens nuclear receptor subfam...    31   4.2  
AL358937-4|CAI95320.1|  626|Homo sapiens nuclear receptor subfam...    31   4.2  
AL358937-3|CAM22558.1|  637|Homo sapiens nuclear receptor subfam...    31   4.2  
AF070530-1|AAC28630.1|  416|Homo sapiens unknown protein.              31   4.2  
U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ p...    31   7.4  
D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding p...    31   7.4  
AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2,...    31   7.4  
AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2,...    31   7.4  
AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2,...    31   7.4  
AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2,...    31   7.4  
AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger p...    31   7.4  
AK054581-1|BAB70764.1|  262|Homo sapiens protein ( Homo sapiens ...    30   9.8  

>AF492646-1|AAO85488.1|  546|Homo sapiens proline rich, vinculin and
           TIR domain containing protein-B protein.
          Length = 546

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
 Frame = +2

Query: 386 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565
           V P A S  +P T     T+ +  VE     A P S  + I     +     PC +    
Sbjct: 139 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 193

Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP-SAYLTPSSL 724
           P+  S      P     P P  P TP   E +P   PP  S  P SA+LTPSSL
Sbjct: 194 PLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 242


>AB097023-1|BAC77376.1|  712|Homo sapiens putative NFkB activating
           protein protein.
          Length = 712

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
 Frame = +2

Query: 386 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565
           V P A S  +P T     T+ +  VE     A P S  + I     +     PC +    
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332

Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP-SAYLTPSSL 724
           P+  S      P     P P  P TP   E +P   PP  S  P SA+LTPSSL
Sbjct: 333 PLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381


>AB093555-1|BAC44839.1|  712|Homo sapiens TIR domain containing
           adaptor inducing interferon-beta protein.
          Length = 712

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
 Frame = +2

Query: 386 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565
           V P A S  +P T     T+ +  VE     A P S  + I     +     PC +    
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332

Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP-SAYLTPSSL 724
           P+  S      P     P P  P TP   E +P   PP  S  P SA+LTPSSL
Sbjct: 333 PLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381


>AB086380-1|BAC55579.1|  712|Homo sapiens TICAM-1 protein.
          Length = 712

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
 Frame = +2

Query: 386 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYIN 565
           V P A S  +P T     T+ +  VE     A P S  + I     +     PC +    
Sbjct: 278 VAPDATSTGLPDTPAAPETSTNYPVECTEGSAGPQSLPLPI-----LEPVKNPCSVKDQT 332

Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP-SAYLTPSSL 724
           P+  S      P     P P  P TP   E +P   PP  S  P SA+LTPSSL
Sbjct: 333 PLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSSTPCSAHLTPSSL 381


>AL359706-1|CAI12865.1|  495|Homo sapiens nuclear fragile X mental
           retardation protein interacting protein 1 protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 581 PNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP 697
           P+S  QPP      P  P  P+  +  PG +PP  +++P
Sbjct: 61  PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98


>AL354816-1|CAC40689.2|  495|Homo sapiens nuclear fragile X mental
           retardation protein interacting protein 1 protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 581 PNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP 697
           P+S  QPP      P  P  P+  +  PG +PP  +++P
Sbjct: 61  PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98


>AF159548-1|AAF15315.1|  495|Homo sapiens nuclear FMRP interacting
           protein 1 protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 581 PNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAP 697
           P+S  QPP      P  P  P+  +  PG +PP  +++P
Sbjct: 61  PSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98


>X89894-1|CAA61984.1|  443|Homo sapiens nuclear receptor protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>S81243-1|AAB36006.1|  684|Homo sapiens CHN protein.
          Length = 684

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 93  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144


>D78579-1|BAA11419.1|  626|Homo sapiens neuron derived orphan
           receptor protein.
          Length = 626

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>AL359710-3|CAI95139.1|  443|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 443

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>AL359710-2|CAI95138.1|  626|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 626

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>AL359710-1|CAM16648.1|  637|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 637

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 46  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97


>AL358937-4|CAI95320.1|  626|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 626

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 35  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86


>AL358937-3|CAM22558.1|  637|Homo sapiens nuclear receptor subfamily
           4, group A, member 3 protein.
          Length = 637

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
           + +L  DL  TE  + + T  SLP++S+ ++GY   Y +    V     P +K+
Sbjct: 46  YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97


>AF070530-1|AAC28630.1|  416|Homo sapiens unknown protein.
          Length = 416

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 515 LALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEA 694
           L ++     PC +    P+  S      P     P P  P TP   E +P   PP  S  
Sbjct: 20  LPILEPVKNPCSVKDQTPLQLSVEDTTSPNTK--PCPPTPTTP---ETSPPPPPPPPSST 74

Query: 695 P-SAYLTPSSL 724
           P SA+LTPSSL
Sbjct: 75  PCSAHLTPSSL 85


>U17838-1|AAC50820.2| 1719|Homo sapiens zinc finger protein RIZ
            protein.
          Length = 1719

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 308  TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481
            TV+S P+V       +   L +  L  ++ P+ PS   P    L   T    +     L 
Sbjct: 938  TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 997

Query: 482  TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661
             PSSS       A  H    PC     N   +SP  I  P  +  P P  P  P     +
Sbjct: 998  APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 1046

Query: 662  PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751
            PG  PP  S + S+  + SS   +   S+P
Sbjct: 1047 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 1074


>D45132-1|BAA08110.1| 1482|Homo sapiens zinc-finger DNA-binding
            protein protein.
          Length = 1482

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 308  TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481
            TV+S P+V       +   L +  L  ++ P+ PS   P    L   T    +     L 
Sbjct: 737  TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 796

Query: 482  TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661
             PSSS       A  H    PC     N   +SP  I  P  +  P P  P  P     +
Sbjct: 797  APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 845

Query: 662  PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751
            PG  PP  S + S+  + SS   +   S+P
Sbjct: 846  PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 873


>AL583942-2|CAH70943.1| 1718|Homo sapiens PR domain containing 2, with
            ZNF domain protein.
          Length = 1718

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 308  TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481
            TV+S P+V       +   L +  L  ++ P+ PS   P    L   T    +     L 
Sbjct: 937  TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 996

Query: 482  TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661
             PSSS       A  H    PC     N   +SP  I  P  +  P P  P  P     +
Sbjct: 997  APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 1045

Query: 662  PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751
            PG  PP  S + S+  + SS   +   S+P
Sbjct: 1046 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 1073


>AL031277-4|CAI19344.1| 1540|Homo sapiens PR domain containing 2, with
            ZNF domain protein.
          Length = 1540

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 308  TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481
            TV+S P+V       +   L +  L  ++ P+ PS   P    L   T    +     L 
Sbjct: 795  TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 854

Query: 482  TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661
             PSSS       A  H    PC     N   +SP  I  P  +  P P  P  P     +
Sbjct: 855  APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 903

Query: 662  PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751
            PG  PP  S + S+  + SS   +   S+P
Sbjct: 904  PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 931


>AL031277-3|CAB37643.1| 1481|Homo sapiens PR domain containing 2, with
            ZNF domain protein.
          Length = 1481

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 308  TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481
            TV+S P+V       +   L +  L  ++ P+ PS   P    L   T    +     L 
Sbjct: 736  TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 795

Query: 482  TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661
             PSSS       A  H    PC     N   +SP  I  P  +  P P  P  P     +
Sbjct: 796  APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 844

Query: 662  PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751
            PG  PP  S + S+  + SS   +   S+P
Sbjct: 845  PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 872


>AL031277-2|CAI19343.1| 1718|Homo sapiens PR domain containing 2, with
            ZNF domain protein.
          Length = 1718

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 308  TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481
            TV+S P+V       +   L +  L  ++ P+ PS   P    L   T    +     L 
Sbjct: 937  TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 996

Query: 482  TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661
             PSSS       A  H    PC     N   +SP  I  P  +  P P  P  P     +
Sbjct: 997  APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 1045

Query: 662  PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751
            PG  PP  S + S+  + SS   +   S+P
Sbjct: 1046 PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 1073


>AB208877-1|BAD92114.1| 1576|Homo sapiens PR-domain zinc finger
            protein 2 variant protein.
          Length = 1576

 Score = 30.7 bits (66), Expect = 7.4
 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
 Frame = +2

Query: 308  TVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 481
            TV+S P+V       +   L +  L  ++ P+ PS   P    L   T    +     L 
Sbjct: 795  TVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLP 854

Query: 482  TPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFA 661
             PSSS       A  H    PC     N   +SP  I  P  +  P P  P  P     +
Sbjct: 855  APSSS-------ASPH----PCPSPLSNATAQSPLPILSPTVSPSPSPIPPVEPLMSAAS 903

Query: 662  PGVKPPLSSEAPSAYLTPSSLGMAKGVSAP 751
            PG  PP  S + S+  + SS   +   S+P
Sbjct: 904  PG--PPTLSSSSSSSSSSSSFSSSSSSSSP 931


>AK054581-1|BAB70764.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30019 fis, clone 3NB692000545. ).
          Length = 262

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 596 QPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSL 724
           +PP +  PFP +P +P    FAP ++PP   +AP   + P  L
Sbjct: 85  RPPSS--PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,631,183
Number of Sequences: 237096
Number of extensions: 2826129
Number of successful extensions: 7159
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 6683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7146
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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