Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_M23
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA...    31   2.8  
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro...    30   3.7  
AY118560-1|AAM49929.1|  528|Drosophila melanogaster LD37992p pro...    30   3.7  
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio...    30   3.7  
AF467271-1|AAM74566.1|  528|Drosophila melanogaster coronin prot...    30   3.7  
AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.    30   3.7  
AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA...    30   3.7  
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD...    30   3.7  
AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB...    30   3.7  
AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC...    30   3.7  
AE013599-240|AAS64781.1|  528|Drosophila melanogaster CG9446-PC,...    30   3.7  
AE013599-239|AAM70835.1|  528|Drosophila melanogaster CG9446-PB,...    30   3.7  
AE013599-238|AAF57403.1|  528|Drosophila melanogaster CG9446-PA,...    30   3.7  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.6  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.6  

>AE014134-759|AAF50995.3| 1118|Drosophila melanogaster CG15635-PA
           protein.
          Length = 1118

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +2

Query: 566 PIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSLGMAKGVS 745
           P + SPN I QPP +  P P++   P    + P   P      P+  L P + G+  G  
Sbjct: 439 PPLGSPNQIGQPPGSLLP-PNVGIYPPSTGWIPPSGPLTQGGHPTGSLLPPNTGLPPGSI 497

Query: 746 APL 754
            PL
Sbjct: 498 PPL 500


>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
           protein.
          Length = 1153

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 563 NPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSLGMA 733
           +P  + P S+H P  +  P  S P T       PG  PP   ++P A+ T    G+A
Sbjct: 313 SPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 367


>AY118560-1|AAM49929.1|  528|Drosophila melanogaster LD37992p
           protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +1

Query: 607 DLTSISINPLNAVLXXVRAGGKASVVIR----GSISVSHPLVTGH 729
           D T  ++NP    +    AGG A +V+     G I+  HPLV GH
Sbjct: 36  DSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIAADHPLVGGH 80


>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
            corepressor Atro protein.
          Length = 1985

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 563  NPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSLGMA 733
            +P  + P S+H P  +  P  S P T       PG  PP   ++P A+ T    G+A
Sbjct: 1145 SPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199


>AF467271-1|AAM74566.1|  528|Drosophila melanogaster coronin
           protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +1

Query: 607 DLTSISINPLNAVLXXVRAGGKASVVIR----GSISVSHPLVTGH 729
           D T  ++NP    +    AGG A +V+     G I+  HPLV GH
Sbjct: 36  DSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIAADHPLVGGH 80


>AF217844-1|AAF34752.1| 1966|Drosophila melanogaster GRUNGE protein.
          Length = 1966

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 563  NPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSLGMA 733
            +P  + P S+H P  +  P  S P T       PG  PP   ++P A+ T    G+A
Sbjct: 1145 SPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199


>AE014296-1461|AAN12008.1| 1966|Drosophila melanogaster CG6964-PA,
            isoform A protein.
          Length = 1966

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 563  NPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSLGMA 733
            +P  + P S+H P  +  P  S P T       PG  PP   ++P A+ T    G+A
Sbjct: 1145 SPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199


>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
            isoform D protein.
          Length = 1985

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 563  NPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSLGMA 733
            +P  + P S+H P  +  P  S P T       PG  PP   ++P A+ T    G+A
Sbjct: 1145 SPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199


>AE014296-1459|AAF50413.2| 1985|Drosophila melanogaster CG6964-PB,
            isoform B protein.
          Length = 1985

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 563  NPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSLGMA 733
            +P  + P S+H P  +  P  S P T       PG  PP   ++P A+ T    G+A
Sbjct: 1145 SPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199


>AE014296-1458|AAO41268.1| 1988|Drosophila melanogaster CG6964-PC,
            isoform C protein.
          Length = 1988

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +2

Query: 563  NPIIKSPNSIHQPPQT*HPFPSIP*TPYXXEFAPGVKPPLSSEAPSAYLTPSSLGMA 733
            +P  + P S+H P  +  P  S P T       PG  PP   ++P A+ T    G+A
Sbjct: 1145 SPAQQPPRSMHDPQSSREPPTSQPSTTMAGSSGPGGPPP--QQSPHAHRTSPLPGLA 1199


>AE013599-240|AAS64781.1|  528|Drosophila melanogaster CG9446-PC,
           isoform C protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +1

Query: 607 DLTSISINPLNAVLXXVRAGGKASVVIR----GSISVSHPLVTGH 729
           D T  ++NP    +    AGG A +V+     G I+  HPLV GH
Sbjct: 36  DSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIAADHPLVGGH 80


>AE013599-239|AAM70835.1|  528|Drosophila melanogaster CG9446-PB,
           isoform B protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +1

Query: 607 DLTSISINPLNAVLXXVRAGGKASVVIR----GSISVSHPLVTGH 729
           D T  ++NP    +    AGG A +V+     G I+  HPLV GH
Sbjct: 36  DSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIAADHPLVGGH 80


>AE013599-238|AAF57403.1|  528|Drosophila melanogaster CG9446-PA,
           isoform A protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +1

Query: 607 DLTSISINPLNAVLXXVRAGGKASVVIR----GSISVSHPLVTGH 729
           D T  ++NP    +    AGG A +V+     G I+  HPLV GH
Sbjct: 36  DSTFCAVNPKFLAIIVESAGGGAFIVLPHNKVGRIAADHPLVGGH 80


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 232  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 232  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,720,482
Number of Sequences: 53049
Number of extensions: 859886
Number of successful extensions: 2708
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2705
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)