Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M22
(872 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 8e-06
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 47 2e-05
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 46 4e-05
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 5e-05
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 43 3e-04
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 43 4e-04
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 41 0.002
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.004
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 39 0.006
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 38 0.011
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 38 0.011
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 37 0.019
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.025
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 37 0.025
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 34 0.13
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 33 0.40
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 33 0.40
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 32 0.53
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 32 0.70
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.6
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 3.8
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 5.0
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 29 5.0
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 5.0
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 5.2
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 29 6.6
SB_35258| Best HMM Match : LEA_4 (HMM E-Value=1.8) 28 8.7
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 48.4 bits (110), Expect = 8e-06
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSVSWIKRLDISTPISM 464
G S + ++LW+PD+ L N A ++A Y +A+ VS+ G W+ ++T +
Sbjct: 133 GISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLNMWLAPTILTTSCKI 192
Query: 465 QLDNWPNDMQTCTFKXGSRMHNSDEMD 545
+ +P D Q+CT K GS +++ +D
Sbjct: 193 NVKYFPFDQQSCTLKFGSWTYDAGSVD 219
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAAATTAGDYALRARV------SNNGSVSWIKRLDISTPISMQLDN 476
V +W+PD++L N A+T +L ++ S++GS +W+ I T + +
Sbjct: 50 VEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVILSSDGSAAWLSPAIIKTECKVDVRL 109
Query: 477 WPNDMQTCTFKXGSRMHNSDEMDFVIDK 560
+P D+Q C K GS H+ ++D + K
Sbjct: 110 FPFDVQYCDLKFGSWTHDGLKIDIQLRK 137
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 46.0 bits (104), Expect = 4e-05
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +3
Query: 324 ERLWRPDVVLLNAAATT---AGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPN 485
+ +W PD+ LLN T AG ++ V N G W + + SM L WP
Sbjct: 149 KEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVENTGKCVWSGPVTFTFTCSMALSRWPF 208
Query: 486 DMQTCTFKXGSRMHNSDEM 542
D QTC K GS + S+ M
Sbjct: 209 DQQTCAMKFGSLSYGSNLM 227
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKRLDISTPISMQLDN 476
++ +R+W+PDV+L N A+T +L ++ N GS +W+ I + + +
Sbjct: 108 IAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAPAIIKSECKIDVRF 167
Query: 477 WPNDMQTCTFKXGSRMHNSDEMD 545
+P D+Q+C GS H+ ++D
Sbjct: 168 FPFDVQSCELTFGSWTHDGLKID 190
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 482
VS ++W PD+VL N A A+T G ++ R VS++G W+ + S+ ++++ +P
Sbjct: 60 VSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKNMWLAPVIFSSSCTIKIKYFP 119
Query: 483 NDMQTCTFKXGSRMHNSDEMD 545
D Q C+ K GS + +D
Sbjct: 120 FDDQYCSLKFGSWTFDGFHLD 140
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 42.7 bits (96), Expect = 4e-04
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLNAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQL 470
G + S+ +W PD+ +LN+A + +R +++ G V W+ L + T M +
Sbjct: 61 GIKQMTLRSKLIWTPDISVLNSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDI 120
Query: 471 DNWPNDMQTCTFKXGSRMHNSDEMD---FVIDKRXYXMFESGAW 593
++P D Q C + GS + MD F E+G W
Sbjct: 121 AHFPFDNQACELRFGSWSTSLRYMDVHPFEDTANLQYFVENGEW 164
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 41.9 bits (94), Expect = 7e-04
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 324 ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPND 488
+++W+PD L N AG D +L RV NG+V++ R+ + M+ N+P D
Sbjct: 135 DKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKMEFRNFPMD 194
Query: 489 MQTCTFKXGSRMHNSDEMDFVI-DKRXY 569
Q+C S DE+ ++ D R Y
Sbjct: 195 RQSCPVTISSYFFPEDEIYYIWGDLRIY 222
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 41.9 bits (94), Expect = 7e-04
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSVSWIKRLDISTPISM 464
G + V +W PD+VL N + ++G+ + + + ++G+V W+ + + + +
Sbjct: 233 GMKSIKVDPSCVWVPDIVLYNNVDSDSSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKI 292
Query: 465 QLDNWPNDMQTCTFKXGSRMHNSDE 539
+ N+P D Q C + GS ++ E
Sbjct: 293 DITNFPLDEQFCKLEFGSWAYDGFE 317
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSNNGSVSWIKRLDISTPISM 464
G T + ++ +W PD+VL ++A + Y +S +GS +W + +
Sbjct: 63 GVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISKDGSSAWFSPASFRSTCKI 122
Query: 465 QLDNWPNDMQTCTFKXGSRMHNSDEMD 545
+ +P D QTC K GS + ++D
Sbjct: 123 DVTYFPFDEQTCYMKFGSWTYTIADVD 149
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLN--AAATTAGDYAL--RARVSNNGSVSWIKRLDISTPISM 464
G ++ V+ +W+PD+VL + T Y RA + +NG W +I + ++
Sbjct: 82 GLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMHNGYTEWFAPTEIHSICAI 141
Query: 465 QLDNWPNDMQTCTFKXGSRMHNSDEMD 545
+ +P D Q C K GS ++ +++
Sbjct: 142 DITYFPFDEQFCKMKFGSWSYSGRQLN 168
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +3
Query: 330 LWRPDVVLLNAAAT----TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 497
LW+PD+ L N A + + + + +V+ +G+ +W+ +T + + +P D Q
Sbjct: 73 LWKPDIYLYNNADSGYDGSLYGFTAKIKVNYSGTNTWLAPKIFTTSCKINVKYFPFDQQE 132
Query: 498 CTFKXGSRMHNSDEMD 545
C K GS ++++ +D
Sbjct: 133 CRLKFGSWTYDANSVD 148
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 324 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 503
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 504 FKXGS 518
S
Sbjct: 86 ISFES 90
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +3
Query: 318 SSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNW 479
S + +W PDV L+N AG L V +G V WI + ++ ++++ W
Sbjct: 424 SPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGKVDWIAQASFTSTCNLRVRFW 483
Query: 480 PNDMQTCTFKXGSRMHNSDEMDFVID 557
P D Q CT S + E+ +D
Sbjct: 484 PMDDQFCTLTFSSWTYTESEIALKMD 509
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = +3
Query: 285 QGXWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR----ARVSNNGSVSWIKRLDI 446
Q +G +V ER +W PDVVLLN A ++ + V +NG V W+ + +
Sbjct: 52 QSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNEGNPVLVESNGVVRWLAPVVL 111
Query: 447 STPISMQLDNWPNDMQTCTFKXGSRMHNSDEM 542
+ M + ++P D Q C K S + E+
Sbjct: 112 KSRCKMDVRSYPFDEQYCGLKFASWTGSQSEL 143
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = +3
Query: 327 RLWRPDVVLLNA--AATTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQ 494
++WRPD NA ++ TA D + + ++ NG V + + I+ M+L ++P D Q
Sbjct: 34 KMWRPDPFCYNARESSLTASDDDINSMMTIHPNGDVVYSRMTIITAECEMKLHDFPMDEQ 93
Query: 495 TCTFKXGSRMHNS 533
C K GS +++
Sbjct: 94 QCHLKLGSYSYST 106
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 37.9 bits (84), Expect = 0.011
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +3
Query: 318 SSERLWRPDVVLLNAAATT---AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNW 479
S + +W PDV L+N A + AG + V G V W+ ++ +++ W
Sbjct: 23 SPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGGKVEWVAPASFTSDCKLRVRYW 82
Query: 480 PNDMQTCTFKXGSRMHNSDEM 542
P D Q CT S ++ E+
Sbjct: 83 PIDDQFCTLTFSSWTYDDQEI 103
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 37.9 bits (84), Expect = 0.011
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLNAA----ATTAGD--------YALRARVSNNGSVSWIKRL 440
G S VS +R W PD++L N+ + D Y + + +NG SW+
Sbjct: 39 GVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKYKTQIEIRSNGYNSWLSPA 98
Query: 441 DISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMDFVID 557
+ + +P D Q CT + GS ++ ++D ID
Sbjct: 99 MFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQID 137
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 37.1 bits (82), Expect = 0.019
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +3
Query: 330 LWRPDVVLLNAA--ATTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 497
LW+PD+VL N Y +V + G + W + T + + +P D QT
Sbjct: 116 LWKPDMVLYNNVNDEDRGEQYLFNTKVIIYSTGDIEWYSPNILKTHCKIDIQYFPFDTQT 175
Query: 498 CTFKXGSRMHNSDEMD 545
C GS +N ++D
Sbjct: 176 CKLTFGSWTYNGLKID 191
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 36.7 bits (81), Expect = 0.025
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 327 RLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 494
R+WRPD++L N A T G + + ++ +GS W+ + + + +P D Q
Sbjct: 103 RVWRPDLILYNNADRDTDGALDRFYTKVQLKFDGSSLWLAPIIFKSTCKFDVAYFPFDEQ 162
Query: 495 TCTFKXGSRMHNSDEMDFV 551
+C K GS ++ ++ V
Sbjct: 163 SCILKFGSWTYDGLRLNIV 181
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 36.7 bits (81), Expect = 0.025
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 327 RLWRPDVVLL-NAAATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 494
++W PD++L NA T AG Y S++G+ W ++ ++ + +P D Q
Sbjct: 153 KVWIPDIILYNNADETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQ 212
Query: 495 TCTFKXGS 518
C+ K GS
Sbjct: 213 NCSLKFGS 220
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +3
Query: 384 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMD 545
+ + +VS+ G W+ ++T + + +P D Q+CT K GS +++ +D
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 66
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 402 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMDF--VIDKRXY-- 569
V+N G V W + S+++ WP D+Q C+ GS + + ++ + D Y
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 80
Query: 570 XMFESGAW 593
+SG W
Sbjct: 81 RFMQSGDW 88
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 402 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMDF--VIDKRXY-- 569
V+N G V W + S+++ WP D+Q C+ GS + + ++ + D Y
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 161
Query: 570 XMFESGAW 593
+SG W
Sbjct: 162 RFMQSGDW 169
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 32.3 bits (70), Expect = 0.53
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 357 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSD 536
N A T + + ++ N+G W I + ++ + +P D Q C K GS +N
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64
Query: 537 EMDFV 551
E++ V
Sbjct: 65 EVNIV 69
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 330 LWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 509
+W PD NA + + NG + + R + M L N+P D+Q C+
Sbjct: 151 IWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQMDLFNFPLDVQRCSLV 210
Query: 510 XGSRMHNSDEMDF 548
S + ++DF
Sbjct: 211 LESFAYTGRQIDF 223
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 393 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMDF 548
+A V +NG W +I + + + +P D Q C K GS + +++F
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNF 72
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +3
Query: 330 LWRPDVVLLNAAA----TTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 497
+W P V++ N A + R V ++G+V W+ I + + + +P D Q
Sbjct: 576 IWTPPVIIYNQAGDLGESITSSNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQL 635
Query: 498 CTFKXGSRMHNSDEMD 545
C GS ++ ++D
Sbjct: 636 CKIIFGSWHYDVSKLD 651
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 399 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 509
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 330 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 497
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 498 CTFKXGSRMHNSDEM 542
C GS + +++
Sbjct: 77 CNLVFGSYGYTDNDI 91
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 330 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 497
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 498 CTFKXGSRMHNSDEM 542
C GS + +++
Sbjct: 204 CNLVFGSYGYTDNDI 218
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 324 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 494
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 495 TC 500
C
Sbjct: 92 VC 93
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 306 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 416
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 402 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMD 545
+ + G + W + T + + +P D QTC GS +N ++D
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 411 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMDFV 551
NG W+ + +++ + + +P D Q C+ K GS ++ + +D V
Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLV 68
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 330 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 500
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 214 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 110
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 25.0 bits (52), Expect(2) = 5.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 477 WPNDMQTCTFKXGSRMHNSDEMD 545
+P D Q C K GS H+S +D
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSRLD 1531
Score = 22.2 bits (45), Expect(2) = 5.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 315 VSSERLWRPDVVLLN 359
V+ E +W PD+V+ N
Sbjct: 1492 VAPEEVWVPDIVIYN 1506
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 408 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMD 545
+NG+ W + + +++ +P D QTC K GS H+ +D
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLD 252
>SB_35258| Best HMM Match : LEA_4 (HMM E-Value=1.8)
Length = 291
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = -3
Query: 216 DSRMLACLKCRVRLTTILESGGDSRSYVARSESIMRDSDVAFSHSAALAIAQVRRNGNQN 37
++R C R TT+ ++ ++R+ V +++ I R + H+ + + +RN
Sbjct: 106 NTRTTVCKAQRNTRTTVCKAQRNTRTTVCKAQHITRTTVYMAQHNTRTTVYKAQRNTRTT 165
Query: 36 NISRRHFMTTPV 1
+H T V
Sbjct: 166 VYKAQHITRTTV 177
>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 384 SPRRWLQPRLAVPRQASTSVPRTPAKCCSPIXPA 283
SPR+ L + P+ A TS RTP P+ PA
Sbjct: 629 SPRQTLSAPPSRPKTAPTSAQRTPEPIRKPLVPA 662
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,500,865
Number of Sequences: 59808
Number of extensions: 467881
Number of successful extensions: 1168
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2503194881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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