Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M22
(872 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 51 4e-08
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 48 5e-07
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 44 8e-06
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 44 8e-06
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 40 7e-05
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 40 1e-04
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 51.2 bits (117), Expect = 4e-08
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 482
V S+ +WRPD+VL N A G Y + +A V NNG V W + S+ ++ +P
Sbjct: 104 VPSDHIWRPDIVLYNNAD---GHYEVTLMTKATVYNNGMVIWQPPAVYKSSCSIDVEYFP 160
Query: 483 NDMQTCTFKXGSRMHNSDEMD 545
D+QTC K GS ++ ++D
Sbjct: 161 YDVQTCVLKLGSWTYDGFKVD 181
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 47.6 bits (108), Expect = 5e-07
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +3
Query: 324 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 491
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGEVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 492 QTCTFKXGSRMHNSDEMDFVI 554
QTC K GS N D++ +
Sbjct: 163 QTCIMKFGSWTFNGDQVSLAL 183
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 46.0 bits (104), Expect = 2e-06
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 491
V S+ +WRPD+VL N A A +A + + G V W + + ++ +P D
Sbjct: 104 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKPPAIYKSSCEIDVEYFPFDE 163
Query: 492 QTCTFKXGSRMHNSDEMD 545
QTC K GS ++ ++D
Sbjct: 164 QTCVLKFGSWTYDGFKVD 181
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 46.0 bits (104), Expect = 2e-06
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 491
V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P D
Sbjct: 100 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDE 159
Query: 492 QTCTFKXGSRMHNSDEMD 545
QTC K GS ++ ++D
Sbjct: 160 QTCVMKFGSWTYDGFQVD 177
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 45.6 bits (103), Expect = 2e-06
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 491
++ +LW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 492 QTCTFKXGSRMHNSDEMDFVID 557
Q C K GS ++ +++D +++
Sbjct: 160 QHCEMKFGSWTYDGNQLDLILN 181
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 45.6 bits (103), Expect = 2e-06
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 491
++ +LW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 100 ITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGSCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 492 QTCTFKXGSRMHNSDEMDFVID 557
Q C K GS ++ +++D +++
Sbjct: 160 QHCEMKFGSWTYDGNQLDLILN 181
Score = 25.4 bits (53), Expect = 2.3
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Frame = +2
Query: 113 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 277
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 278 WNAGXMG 298
WN G
Sbjct: 87 WNDSEYG 93
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 43.6 bits (98), Expect = 8e-06
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 464
G V SE++W PD+VL N G+Y + +A + G V W + M
Sbjct: 100 GVEMLYVPSEQIWLPDIVLYN---NWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEM 156
Query: 465 QLDNWPNDMQTCTFKXGSRMHNSDEMD 545
++ +P D QTC K GS +N +++
Sbjct: 157 NVEYFPYDEQTCLMKFGSWTYNGAQVE 183
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 43.6 bits (98), Expect = 8e-06
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 464
G + V SE +W PD+VL N A G+Y + +A + G V W + +
Sbjct: 106 GVTELYVPSEHIWLPDIVLYNNAD---GEYVVTTLTKAILHYTGKVIWTPPAIFKSSCEI 162
Query: 465 QLDNWPNDMQTCTFKXGSRMHNSDEMD 545
+ +P D QTC K GS ++ +++D
Sbjct: 163 DVRYFPFDQQTCFMKFGSWTYDGNQID 189
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 42.7 bits (96), Expect = 1e-05
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 491
+ RLW+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 83 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 142
Query: 492 QTCTFKXGSRMHNSDEMD 545
Q C K GS ++ ++D
Sbjct: 143 QRCEMKFGSWTYDGFQLD 160
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 41.9 bits (94), Expect = 2e-05
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 315 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 491
+ R+W+PDV++ N+A G Y V NNGS ++ + + + +P D
Sbjct: 115 IPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGSCLYVPPGIFKSTCKIDITWFPFDD 174
Query: 492 QTCTFKXGSRMHNSDEMD 545
Q C K GS ++ ++D
Sbjct: 175 QRCEMKFGSWTYDGFQLD 192
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 40.3 bits (90), Expect = 7e-05
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +3
Query: 297 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 464
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 94 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 150
Query: 465 QLDNWPNDMQTCTFKXGSRMHNSDEMD 545
++ +P D QTC K GS ++ +D
Sbjct: 151 DVEYFPFDEQTCFMKFGSWTYDGYMVD 177
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 39.9 bits (89), Expect = 1e-04
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 330 LWRPDVVLLN-AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 503
+WRPDVVL N A + Y V + G V W+ + + + WP D Q C
Sbjct: 118 VWRPDVVLYNNAGGSDQHHYGDTNVLVYSEGKVLWVPPTEYHAFCELNMRLWPFDYQKCI 177
Query: 504 FKXGS 518
K GS
Sbjct: 178 VKIGS 182
Score = 33.1 bits (72), Expect = 0.011
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +2
Query: 125 LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGXM 295
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 296 G 298
G
Sbjct: 106 G 106
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,464
Number of Sequences: 2352
Number of extensions: 15050
Number of successful extensions: 49
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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