Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M21
(863 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 306 1e-83
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 306 1e-83
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 305 3e-83
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 305 3e-83
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 287 9e-78
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 287 9e-78
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 273 9e-74
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 142 2e-34
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 141 6e-34
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 139 2e-33
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 139 2e-33
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 138 3e-33
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 138 4e-33
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 137 8e-33
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 136 1e-32
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 133 2e-31
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 106 2e-23
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 106 2e-23
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.3
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 2.3
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 30 2.3
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 4.0
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 28 9.2
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 28 9.2
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 28 9.2
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 306 bits (751), Expect = 1e-83
Identities = 135/163 (82%), Positives = 149/163 (91%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGR 594
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +3
Query: 591 QKSKLEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSDXAFM 713
+KSKL F +YP+PQVST+VV PYNS H L H+D + +
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSIL 203
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 306 bits (751), Expect = 1e-83
Identities = 135/163 (82%), Positives = 149/163 (91%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGR 594
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +3
Query: 591 QKSKLEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSDXAFM 713
+KSKL F +YP+PQVST+VV PYNS H L H+D + +
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSIL 203
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 305 bits (748), Expect = 3e-83
Identities = 135/163 (82%), Positives = 148/163 (90%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGR 594
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +3
Query: 591 QKSKLEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSDXAFM 713
+KSKL F +YP+PQVST+VV PYNS H L H+D + +
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSIL 203
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 305 bits (748), Expect = 3e-83
Identities = 135/163 (82%), Positives = 148/163 (90%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGR 594
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYG+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +3
Query: 591 QKSKLEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSDXAFM 713
+KSKL F +YP+PQVST+VV PYNS H L H+D + +
Sbjct: 163 KKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSIL 203
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 287 bits (703), Expect = 9e-78
Identities = 126/163 (77%), Positives = 143/163 (87%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGR 594
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYG+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +3
Query: 591 QKSKLEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSDXAFM 713
+KSKL F IYP+PQVSTAVV PYNS H L H+D A +
Sbjct: 163 KKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVL 203
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 287 bits (703), Expect = 9e-78
Identities = 126/163 (77%), Positives = 143/163 (87%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGR 594
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYG+
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGK 163
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +3
Query: 591 QKSKLEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSDXAFM 713
+KSKL F IYP+PQVSTAVV PYNS H L H+D A +
Sbjct: 163 KKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVL 203
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 273 bits (670), Expect = 9e-74
Identities = 118/163 (72%), Positives = 141/163 (86%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGR 594
R+RKLAD CTGLQGFL+F+ LL+ERLSVD+G+
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGK 163
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3
Query: 591 QKSKLEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
+KSKL F IYP+PQVSTAVV PYNS H L H+D
Sbjct: 163 KKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTD 199
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 142 bits (345), Expect = 2e-34
Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 276
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 277 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 456
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 457 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
L F ++P+P+VS VV PYN+ H + ++D
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 197
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 141 bits (341), Expect = 6e-34
Identities = 65/161 (40%), Positives = 95/161 (59%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 160
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
L F ++P+P+VS VV PYN+ H + ++D
Sbjct: 166 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 198
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 139 bits (337), Expect = 2e-33
Identities = 65/161 (40%), Positives = 93/161 (57%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
L F ++P+P+VS VV PYN+ H + ++D
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 197
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 139 bits (337), Expect = 2e-33
Identities = 65/161 (40%), Positives = 93/161 (57%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
L F ++P+P+VS VV PYN+ H + ++D
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 197
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 138 bits (335), Expect = 3e-33
Identities = 66/161 (40%), Positives = 94/161 (58%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
+ F ++P+P+VS VV PYN+ H + ++D
Sbjct: 165 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 197
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 138 bits (334), Expect = 4e-33
Identities = 64/161 (39%), Positives = 95/161 (59%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 160
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
L F ++P+P+VS VV PYN+ H + ++D
Sbjct: 166 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 198
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 137 bits (332), Expect = 8e-33
Identities = 65/161 (40%), Positives = 95/161 (59%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
+ F ++P+P+VS VV PYN+ H + ++D
Sbjct: 165 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 197
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 136 bits (330), Expect = 1e-32
Identities = 64/161 (39%), Positives = 93/161 (57%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
L F ++P+P+VS VV PYN+ H + ++D
Sbjct: 165 LTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 197
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 133 bits (321), Expect = 2e-31
Identities = 64/161 (39%), Positives = 93/161 (57%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 465
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 466 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 588
+RK A+ LQGF + H LL+ ++ +Y
Sbjct: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEY 159
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 603 LEFXIYPAPQVSTAVVXPYNSYPHHHXXLXHSD 701
+ F ++P+P+VS VV PYN+ H + ++D
Sbjct: 165 MTFSVFPSPKVSDTVVEPYNATLSVHQLVENAD 197
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 106 bits (255), Expect = 2e-23
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 288
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 289 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 462
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 463 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGRSL 600
D I + AD L+GF++ H L+E L+ Y + L
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKL 165
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 106 bits (254), Expect = 2e-23
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 288
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 289 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 462
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 463 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGRSL 600
D I + AD L+GF++ H L+E L+ Y + L
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKL 165
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -3
Query: 543 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 364
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 363 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 229
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 184 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 333
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -3
Query: 312 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 142
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 141 G-LANVYRYALTHF 103
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 275 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 150
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +1
Query: 172 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 339
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 340 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 468
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +1
Query: 172 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 339
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 340 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 468
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 9.2
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +1
Query: 172 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 339
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 340 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 468
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,787,840
Number of Sequences: 28952
Number of extensions: 354447
Number of successful extensions: 982
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2019160800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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