Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_M19
         (816 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    31   0.014
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   1.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.7  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
 Frame = +3

Query: 345 SCKTGWI---YEAKTDSCVPK-CTSGCVNGTCEAPEVCTCPEPLVLRRGHCVEPTC-SPA 509
           +CK G++    E+K + C    C +G V  T  A   CTCPE    +        C S  
Sbjct: 325 NCKLGFMGRHCESKVNFCATSPCQNGGVCTTIHAGHKCTCPEGFYGKNCEFSGYDCDSNP 384

Query: 510 CDSYSSCTDFN----VCTCVNNTIALNGSQC 590
           C +   C   +    +C C + T   NG+ C
Sbjct: 385 CQNGGVCRISDGGGYICDCPSGT---NGTNC 412


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 705 YKNIDDVCVPQCLDCRNGECV 767
           +K  + +C    L C NGEC+
Sbjct: 102 FKTDEPICPDGKLSCGNGECI 122


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 705 YKNIDDVCVPQCLDCRNGECV 767
           +K  + +C    L C NGEC+
Sbjct: 109 FKTDEPICPDGKLSCGNGECI 129


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 267 KKRCRGKTNSGSCVITESYVSIEKSQS 347
           KKR     NS SC IT S  +   SQS
Sbjct: 365 KKRYSALINSQSCPITSSGSTDSSSQS 391


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 201 DGKGVATVDVPVIRQRTRLVYNKKRC 278
           D   V T D   +  + + +YN+K+C
Sbjct: 772 DSCTVCTCDAKYLEIKCKRIYNEKQC 797


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -3

Query: 697 SHVHRPGSVHVPLTQRSHRGEHSTGSL 617
           S ++ PG+   P T  SH   H T  L
Sbjct: 116 SDLYFPGATSQPPTDNSHVHHHQTSLL 142


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = -2

Query: 491 LHAVSASEDQRLWTGA 444
           +H+++ ++D+R W+ A
Sbjct: 255 VHSITHNDDERFWSNA 270


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 73  FNCDKLCKRSRRNA 114
           F C KLCK + + A
Sbjct: 155 FRCTKLCKEANKTA 168


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 477 GHCVEPTCSPACDSYSSCTD 536
           G+C +P   P C+ Y    D
Sbjct: 209 GNCEDPEDVPGCEDYYKDVD 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,320
Number of Sequences: 336
Number of extensions: 4015
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)