Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M19
(816 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42620.1 68418.m05188 expressed protein 38 0.008
At3g59420.1 68416.m06627 receptor protein kinase, putative (ACR4... 34 0.098
At5g46560.1 68418.m05733 expressed protein 32 0.52
At1g32190.1 68414.m03959 expressed protein 32 0.52
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 31 0.69
At2g42000.1 68415.m05195 plant EC metallothionein-like family 15... 31 0.91
At2g23240.1 68415.m02775 plant EC metallothionein-like family 15... 31 1.2
At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4) i... 30 1.6
At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger) fa... 30 1.6
At3g53840.1 68416.m05948 protein kinase family protein contains ... 30 1.6
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 30 1.6
At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger) fa... 29 4.9
At5g17900.1 68418.m02099 expressed protein 28 6.4
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 37.9 bits (84), Expect = 0.008
Identities = 30/101 (29%), Positives = 40/101 (39%), Gaps = 5/101 (4%)
Frame = +3
Query: 384 SCVPKCTSGC-VNGTCEAPEVCTCPEPLVLRRGH-CVEPTCSPACDSYSSCTDFNVCTCV 557
S + +C + C NG C + C C L+ GH C +C C+ + CT VC C
Sbjct: 598 SVLGQCPNSCNFNGDCVDGK-CRC---LLGYHGHDCRNRSCPNNCNGHGKCTTQGVCICE 653
Query: 558 NNTIALNGSQ--CAPVCP-DGYYNDPVECSPRCERCVNGTC 671
N ++ S C C G D C RC TC
Sbjct: 654 NGFTGIDCSTAICDEQCSLHGGVCDNGVCEFRCSDYAGYTC 694
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 10/65 (15%)
Frame = +3
Query: 600 CPDGYYNDPVECSPR-CERCVNG--TCTEPGLCTCDSGYKNID---DVCVPQCL----DC 749
C GY+ +C R C NG CT G+C C++G+ ID +C QC C
Sbjct: 620 CLLGYHGH--DCRNRSCPNNCNGHGKCTTQGVCICENGFTGIDCSTAICDEQCSLHGGVC 677
Query: 750 RNGEC 764
NG C
Sbjct: 678 DNGVC 682
>At3g59420.1 68416.m06627 receptor protein kinase, putative (ACR4)
identical to putative receptor protein kinase ACR4
[Arabidopsis thaliana] GI:20302590; contains protein
kinase domain, Pfam:PF00069
Length = 895
Score = 34.3 bits (75), Expect = 0.098
Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Frame = +3
Query: 402 TSGCVNGTCEAPEVC-----TCPEPLVLRRGHCVEPTCSPACDSYSSCTDFNVCTCVNNT 566
T G + GT +P VC PL + G C++ C P S+ + + C +
Sbjct: 311 TCGVLTGTSMSP-VCWGLGFPASIPLAVSPGLCIDTPCPPGTHELSN-QENSPCKFTGSH 368
Query: 567 IALNGSQCAPVCPDGYYNDPVECSPRCERCVNGTCTEPGLCTCDS 701
I L C+ CP G Y V C+ R ++ C+ C S
Sbjct: 369 ICL---PCSTSCPPGMYQKSV-CTERSDQVCVYNCSSCSSHDCSS 409
>At5g46560.1 68418.m05733 expressed protein
Length = 378
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 525 SCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECS-PRCERC-VNGTCTEPGLCTCD 698
+C C ++ +++ N S+ C D +N P++ CE C +NG C + G C+
Sbjct: 55 ACAVAFTCNFLSKSLSSNPSKS--FC-DSNFN-PIDSDLDICEPCPINGECYQ-GKLQCN 109
Query: 699 SGYKNIDDVCV 731
GYKN ++CV
Sbjct: 110 LGYKNQRNLCV 120
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.9 bits (69), Expect = 0.52
Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 11/129 (8%)
Frame = +3
Query: 351 KTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTCPEPLVLRRGHCVEPTC-SPACDSYSS 527
KT W + D C SG +C P+ CP+P C + C +C +
Sbjct: 280 KTIWQEIRRRDESTGCCCSGLCRPSCSCPKP-RCPKPSCSCGCGCGDCGCFKCSCPTLKG 338
Query: 528 CTDFNVC---TCVNNTI--ALNGSQC--APVCPDGYYNDPVECSPRCERCVNGTCTE--- 677
C F+ C +CV++ S C P CP ++C P E C + C
Sbjct: 339 C--FSCCKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKC-PDTECCRSSCCCSGCF 395
Query: 678 PGLCTCDSG 704
LC C G
Sbjct: 396 SWLCCCGGG 404
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +3
Query: 618 NDPVECSPRCERCVNGTCTEPGLCTCDSGYKNIDDVCVPQCLDCRNGEC 764
N + C C +NGTC E C C KN C CR+ +C
Sbjct: 656 NCKIACGKECPCLLNGTCCEK-YCGCPKSCKNRFRGCHCAKSQCRSRQC 703
>At2g42000.1 68415.m05195 plant EC metallothionein-like family 15
protein 84 C-terminal residues identical to EC protein
homolog 1 (SP:P93746) {Arabidopsis thaliana}; contains
Pfam PF02068: Plant PEC family metallothionein profile;
Length = 115
Score = 31.1 bits (67), Expect = 0.91
Identities = 23/69 (33%), Positives = 27/69 (39%)
Frame = +3
Query: 498 CSPACDSYSSCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECSPRCERCVNGTCTE 677
C+ +C S C N C C A G Q VCP G + C+P C T T
Sbjct: 44 CNDSCGCPSPCPGGNSCRC-RMREASAGDQGHMVCPCG---EHCGCNP-CNCPKTQTQTS 98
Query: 678 PGLCTCDSG 704
CTC G
Sbjct: 99 AKGCTCGEG 107
>At2g23240.1 68415.m02775 plant EC metallothionein-like family 15
protein identical to EC protein homolog 2 (SP:Q42377)
{Arabidopsis thaliana}; identical to an EST:
GB:X92116:ATECPRHOM; contains a vertebrate
metallothionein signature (PS00203); contains Pfam
profile PF02068: Plant PEC family metallothionein
Length = 85
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +3
Query: 495 TCSPACDSYSSCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECSPRCERCVNGTCT 674
+C+ C S C C C + A G Q CP G + C+P C T T
Sbjct: 12 SCNDRCGCPSPCPGGESCRCKMMSEASGGDQEHNTCPCG---EHCGCNP-CNCPKTQTQT 67
Query: 675 EPGLCTCDSG 704
CTC G
Sbjct: 68 SAKGCTCGEG 77
>At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4)
identical to SUVH4 [Arabidopsis thaliana] GI:13517749;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH4 (SUVH4) GI:13517748
Length = 624
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/67 (37%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Frame = +3
Query: 492 PTCSPACDSYSSCTDFNVCTCVNNTIALNGSQCAPV-CPDGYY---NDPV-ECSPRC--- 647
P S C+ SCTD C C LNG V DG D V EC P C
Sbjct: 377 PKSSTGCNCRGSCTDSKKCACAK----LNGGNFPYVDLNDGRLIESRDVVFECGPHCGCG 432
Query: 648 ERCVNGT 668
+CVN T
Sbjct: 433 PKCVNRT 439
>At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 636 SPRCERCVNGTCTEPGLCTCDSGYKNIDDV-CVPQCLDCRNGECV 767
S R R NG C+ +C CD Y+ + V C+P+C C + +CV
Sbjct: 83 SRRLPRPNNGPCS---ICLCD--YEAREPVRCIPECNHCFHTDCV 122
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +3
Query: 576 NGSQCAPVCPDGYYNDPVECSPRCERCVNGTCTEPGLCT 692
N C+ D +PV C P C C + C + L T
Sbjct: 90 NNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRT 128
>At3g53840.1 68416.m05948 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 639
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/120 (25%), Positives = 40/120 (33%)
Frame = +3
Query: 297 GSCVITESYVSIEKSQSCKTGWIYEAKTDSCVPKCTSGCVNGTCEAPEVCTCPEPLVLRR 476
G+C S + S T +Y A+ D C +N P V EP V
Sbjct: 160 GNCRGVTSCCWYKTGASVNTYKVYRARPDMC--SAYQSFMNLDLTIP-VSKWGEPAV--- 213
Query: 477 GHCVEPTCSPACDSYSSCTDFNVCTCVNNTIALNGSQCAPVCPDGYYNDPVECSPRCERC 656
E P C S C D C N++ L +C C G+ D V RC
Sbjct: 214 EILWEAPREPVCKSQGDCRDLLNSVCSNDSTNLGQKRC--FCKKGFQWDSVNAVCEVNRC 271
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +3
Query: 210 GVATVD---VPVIRQRTRLVYNKKRCRGKTNSGSCVITESYVSIEKSQ 344
G+A V+ V ++R+R RL+ RCRG + I+++ V ++++Q
Sbjct: 1064 GIAAVEAEIVKILRERERLLSELNRCRGTVSVYESSISKNRVELKQAQ 1111
>At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 336
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 576 NGSQCAPVCPDGYYN-DPVECSPRCERCVNGTCTEPGL 686
NG C P+C Y + + V C P C+ C + C + L
Sbjct: 286 NGIIC-PICLSEYASKETVRCMPECDHCFHVQCIDEWL 322
>At5g17900.1 68418.m02099 expressed protein
Length = 435
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 296 RLVRYNRIIREH*EESIMQDWLDIRGEDRQLCTEMHERVRERNLRGAR 439
R +R II EES Q+ D +D E R+RE+NLR A+
Sbjct: 95 RRIRQAEIIYTEEEESRNQENRD-EDDDEDALEERRRRIREKNLRRAQ 141
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,872,013
Number of Sequences: 28952
Number of extensions: 333725
Number of successful extensions: 968
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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