Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M18
(916 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q93329 Cluster: Putative uncharacterized protein lev-8;... 38 0.47
UniRef50_P48182 Cluster: Acetylcholine receptor subunit beta-typ... 37 0.83
UniRef50_Q9N4M3 Cluster: Acetylcholine receptor protein 6; n=1; ... 36 1.1
UniRef50_Q2XWL0 Cluster: Nicotinic acetylcholine receptor subuni... 36 1.4
UniRef50_Q2XWK8 Cluster: Nicotinic acetylcholine receptor subuni... 36 1.4
UniRef50_A7UFK6 Cluster: Nicotinic acetylcholine receptor alpha ... 36 1.9
UniRef50_A7RFJ5 Cluster: Predicted protein; n=2; Nematostella ve... 36 1.9
UniRef50_P11230 Cluster: Acetylcholine receptor subunit beta pre... 36 1.9
UniRef50_Q23022 Cluster: Acetylcholine receptor subunit alpha-ty... 35 2.5
UniRef50_Q7PJX0 Cluster: ENSANGP00000022703; n=1; Anopheles gamb... 34 5.8
UniRef50_A4FTX5 Cluster: CHRNB4 protein; n=1; Homo sapiens|Rep: ... 34 5.8
UniRef50_Q4S864 Cluster: Chromosome 5 SCAF14709, whole genome sh... 33 7.7
>UniRef50_Q93329 Cluster: Putative uncharacterized protein lev-8;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein lev-8 - Caenorhabditis elegans
Length = 531
Score = 37.5 bits (83), Expect = 0.47
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 245 LQMNXIDKRLSXNXGEWGCSTWL-VSSERLWMPDXVLLN 358
L+M DK+L+ N +WG ++ + S+++W+PD VL N
Sbjct: 81 LEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVLYN 119
>UniRef50_P48182 Cluster: Acetylcholine receptor subunit beta-type
acr-2 precursor; n=3; Rhabditida|Rep: Acetylcholine
receptor subunit beta-type acr-2 precursor -
Caenorhabditis elegans
Length = 575
Score = 36.7 bits (81), Expect = 0.83
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 134 RTIGTPPPXSKIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEWG-CSTW 310
+ + +PP V + L + N+ E ++ L M D +L+ N E+G S
Sbjct: 79 KNVSSPPVVVDFGVAMILLI---NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNL 135
Query: 311 LVSSERLWMPDXVLLN 358
V S+R+W+PD VL N
Sbjct: 136 HVPSDRVWLPDIVLFN 151
>UniRef50_Q9N4M3 Cluster: Acetylcholine receptor protein 6; n=1;
Caenorhabditis elegans|Rep: Acetylcholine receptor
protein 6 - Caenorhabditis elegans
Length = 562
Score = 36.3 bits (80), Expect = 1.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 203 NIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSSERLWMPDXVLLN 358
++ E + + ++ L + +D RLS N E+G T + E LW+PD +L N
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIILYN 96
>UniRef50_Q2XWL0 Cluster: Nicotinic acetylcholine receptor subunit
type C; n=1; Lymnaea stagnalis|Rep: Nicotinic
acetylcholine receptor subunit type C - Lymnaea
stagnalis (Great pond snail)
Length = 506
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 155 PXSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSSER 328
P K+ V L L L ++ E + I L+ D RL E+G L + S++
Sbjct: 54 PMKKLTVKLGLRLSQVLSVDERNQILTISVWLRQEWYDFRLKWEPSEYGGVNVLNIPSDQ 113
Query: 329 LWMPDXVLLN 358
LW PD VL N
Sbjct: 114 LWKPDLVLYN 123
>UniRef50_Q2XWK8 Cluster: Nicotinic acetylcholine receptor subunit
type E; n=16; Protostomia|Rep: Nicotinic acetylcholine
receptor subunit type E - Lymnaea stagnalis (Great pond
snail)
Length = 538
Score = 35.9 bits (79), Expect = 1.4
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 164 KIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSSERLWM 337
K+VV + + L +I E + L+ DK+L+ E+G L V SE +W+
Sbjct: 56 KLVVKMGIRLSQLIDIDEKNQIMTTNVWLRQEWTDKKLTWQASEYGGVDHLYVPSEHIWL 115
Query: 338 PDXVLLN 358
PD VL N
Sbjct: 116 PDIVLYN 122
>UniRef50_A7UFK6 Cluster: Nicotinic acetylcholine receptor alpha
subunit; n=2; Ascaris suum|Rep: Nicotinic acetylcholine
receptor alpha subunit - Ascaris suum (Pig roundworm)
(Ascaris lumbricoides)
Length = 513
Score = 35.5 bits (78), Expect = 1.9
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +2
Query: 155 PXSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSXNXGEWG-CSTWLVSSER 328
P + + L L L ++ E + + L+ IDK+LS + +G S V E
Sbjct: 46 PHEPVTIKLKLRLSQIIDVHEIDQIMTYSVWLKQVWIDKKLSWDPKNYGGVSVLYVPYEM 105
Query: 329 LWMPDXVLLNXXXXTXGGLRSPXPRYLXTGSXSWD 433
+W+PD VL N S +G +W+
Sbjct: 106 IWVPDIVLYNNADSNYNITISTKATLHYSGEVTWE 140
>UniRef50_A7RFJ5 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 328
Score = 35.5 bits (78), Expect = 1.9
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHL-RHANIRESESTVRIQADLQMNXIDKRLSXNXGEWG-CSTWLVSS 322
P + +VV L R A + E + V L+ ++ LS N E+G +T V
Sbjct: 23 PGGNNPVVVTFGAKLGRIAAVDEKNNVVLAHWYLKQKWVNPSLSWNASEFGGVNTLHVEP 82
Query: 323 ERLWMPDXVLLN 358
+RLW+PD VL N
Sbjct: 83 DRLWVPDIVLYN 94
>UniRef50_P11230 Cluster: Acetylcholine receptor subunit beta
precursor; n=30; Gnathostomata|Rep: Acetylcholine
receptor subunit beta precursor - Homo sapiens (Human)
Length = 501
Score = 35.5 bits (78), Expect = 1.9
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 164 KIVVNLTL-HLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLVSSERLWM 337
++ V L L L N ++ E + ++ DL+ D RLS + E G + +++E +W+
Sbjct: 53 RVSVGLILAQLISLNEKDEEMSTKVYLDLEWT--DYRLSWDPAEHDGIDSLRITAESVWL 110
Query: 338 PDXVLLN 358
PD VLLN
Sbjct: 111 PDVVLLN 117
>UniRef50_Q23022 Cluster: Acetylcholine receptor subunit alpha-type
unc-38 precursor; n=9; Chromadorea|Rep: Acetylcholine
receptor subunit alpha-type unc-38 precursor -
Caenorhabditis elegans
Length = 511
Score = 35.1 bits (77), Expect = 2.5
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +2
Query: 155 PXSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSXNXGEWG-CSTWLVSSER 328
P + + L L L ++ E + + L+ ID++LS + +G + V E
Sbjct: 48 PNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEM 107
Query: 329 LWMPDXVLLNXXXXTXGGLRSPXPRYLXTGSXSWD 433
+W+PD VL N S TG +W+
Sbjct: 108 IWVPDIVLYNNADSNYNITISTKATLHYTGEVTWE 142
>UniRef50_Q7PJX0 Cluster: ENSANGP00000022703; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000022703 - Anopheles gambiae
str. PEST
Length = 223
Score = 33.9 bits (74), Expect = 5.8
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 134 RTIGTPPPXSKIVVNLTL--HLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCS 304
RT P VN+T+ ++ ES++ +++ +++ D+ L N EW G
Sbjct: 56 RTNVRPRKDHTQTVNVTVAYYVLTYEFEESDNLLQLGVWMELQWTDEYLRWNSTEWSGIE 115
Query: 305 TWLVSSERLWMPD 343
+ SE +WMPD
Sbjct: 116 RLAIGSEEIWMPD 128
>UniRef50_A4FTX5 Cluster: CHRNB4 protein; n=1; Homo sapiens|Rep:
CHRNB4 protein - Homo sapiens (Human)
Length = 198
Score = 33.9 bits (74), Expect = 5.8
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNKSLRT 124
>UniRef50_Q4S864 Cluster: Chromosome 5 SCAF14709, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 5
SCAF14709, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 733
Score = 33.5 bits (73), Expect = 7.7
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 164 KIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLVSSERLWM 337
++ V L + L ++ E E + L + +D RLS + ++ G + + S +W+
Sbjct: 33 RVPVKLQVSLAQLISVNEREQIMTTNLWLMQHWVDYRLSWDPAKYEGINKLRIPSRLIWL 92
Query: 338 PDXVLLNXXXXTXGGLRSPXPRYLXTGSXSW 430
PD VL N T L GS +W
Sbjct: 93 PDIVLYNNADGTYEVTVYTNAIVLFNGSINW 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,477,138
Number of Sequences: 1657284
Number of extensions: 7877758
Number of successful extensions: 23058
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22237
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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