Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M18
(916 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X14830-1|CAA32939.1| 501|Homo sapiens protein ( Human mRNA for ... 36 0.27
BC023553-1|AAH23553.1| 501|Homo sapiens cholinergic receptor, n... 36 0.27
BC011371-1|AAH11371.1| 501|Homo sapiens cholinergic receptor, n... 36 0.27
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 34 0.83
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 34 0.83
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 34 0.83
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 34 0.83
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 34 0.83
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 34 0.83
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 34 0.83
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 34 0.83
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 34 0.83
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 34 0.83
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 34 0.83
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 34 0.83
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 34 0.83
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 33 1.1
Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine r... 33 1.9
U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine r... 33 1.9
X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4... 32 3.3
>X14830-1|CAA32939.1| 501|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor beta-subunit. ).
Length = 501
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 164 KIVVNLTL-HLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLVSSERLWM 337
++ V L L L N ++ E + ++ DL+ D RLS + E G + +++E +W+
Sbjct: 53 RVSVGLILAQLISLNEKDEEMSTKVYLDLEWT--DYRLSWDPAEHDGIDSLRITAESVWL 110
Query: 338 PDXVLLN 358
PD VLLN
Sbjct: 111 PDVVLLN 117
>BC023553-1|AAH23553.1| 501|Homo sapiens cholinergic receptor,
nicotinic, beta 1 (muscle) protein.
Length = 501
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 164 KIVVNLTL-HLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLVSSERLWM 337
++ V L L L N ++ E + ++ DL+ D RLS + E G + +++E +W+
Sbjct: 53 RVSVGLILAQLISLNEKDEEMSTKVYLDLEWT--DYRLSWDPAEHDGIDSLRITAESVWL 110
Query: 338 PDXVLLN 358
PD VLLN
Sbjct: 111 PDVVLLN 117
>BC011371-1|AAH11371.1| 501|Homo sapiens cholinergic receptor,
nicotinic, beta 1 (muscle) protein.
Length = 501
Score = 35.5 bits (78), Expect = 0.27
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 164 KIVVNLTL-HLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLVSSERLWM 337
++ V L L L N ++ E + ++ DL+ D RLS + E G + +++E +W+
Sbjct: 53 RVSVGLILAQLISLNEKDEEMSTKVYLDLEWT--DYRLSWDPAEHDGIDSLRITAESVWL 110
Query: 338 PDXVLLN 358
PD VLLN
Sbjct: 111 PDVVLLN 117
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.83
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNNADGT 124
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 33.9 bits (74), Expect = 0.83
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 164 KIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSSERLWMP 340
++ V L L ++ N+ E V L+ +D L N ++G + + SE++W P
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 341 DXVLLNXXXXTXGGLRSPXPRYLXTGSXSW 430
D VL N ++ TG +W
Sbjct: 109 DLVLYNNADGDFAIVKFTKVLLQYTGHITW 138
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 33.9 bits (74), Expect = 0.83
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 164 KIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSSERLWMP 340
++ V L L ++ N+ E V L+ +D L N ++G + + SE++W P
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 341 DXVLLNXXXXTXGGLRSPXPRYLXTGSXSW 430
D VL N ++ TG +W
Sbjct: 109 DLVLYNNADGDFAIVKFTKVLLQYTGHITW 138
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.83
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNNADGT 124
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.83
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNNADGT 124
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 33.9 bits (74), Expect = 0.83
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 164 KIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSSERLWMP 340
++ V L L ++ N+ E V L+ +D L N ++G + + SE++W P
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 341 DXVLLNXXXXTXGGLRSPXPRYLXTGSXSW 430
D VL N ++ TG +W
Sbjct: 109 DLVLYNNADGDFAIVKFTKVLLQYTGHITW 138
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 33.9 bits (74), Expect = 0.83
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNKSLRT 124
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.83
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNNADGT 124
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 33.9 bits (74), Expect = 0.83
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNKSLRT 124
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.83
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNNADGT 124
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 33.9 bits (74), Expect = 0.83
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 164 KIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSSERLWMP 340
++ V L L ++ N+ E V L+ +D L N ++G + + SE++W P
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 341 DXVLLNXXXXTXGGLRSPXPRYLXTGSXSW 430
D VL N ++ TG +W
Sbjct: 109 DLVLYNNADGDFAIVKFTKVLLQYTGHITW 138
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.83
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLNXXXXT 373
++R+W+PD VL N T
Sbjct: 106 PAKRIWLPDIVLYNNADGT 124
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 33.9 bits (74), Expect = 0.83
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +2
Query: 164 KIVVNLTLHLRHANIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSSERLWMP 340
++ V L L ++ N+ E V L+ +D L N ++G + + SE++W P
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRP 108
Query: 341 DXVLLNXXXXTXGGLRSPXPRYLXTGSXSW 430
D VL N ++ TG +W
Sbjct: 109 DLVLYNNADGDFAIVKFTKVLLQYTGHITW 138
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 33.5 bits (73), Expect = 1.1
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA---NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLV 316
P S ++++ L L A ++ E E + L+ D RL+ N + G + +
Sbjct: 46 PATSSSQLISIKLQLSLAQLISVNEREQIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRI 105
Query: 317 SSERLWMPDXVLLN 358
++R+W+PD VL N
Sbjct: 106 PAKRIWLPDIVLYN 119
>Y16281-1|CAA76154.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 32.7 bits (71), Expect = 1.9
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSS 322
P ++V L + ++ E + L+ D +L N ++G T L V S
Sbjct: 78 PNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPADFGNITSLRVPS 137
Query: 323 ERLWMPDXVLLNXXXXTXGGLRSPXPRYLXTGSXSW 430
E +W+PD VL N TG+ W
Sbjct: 138 EMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHW 173
>U62431-1|AAB40109.1| 529|Homo sapiens nicotinic acetylcholine
receptor alpha2 subunit precursor protein.
Length = 529
Score = 32.7 bits (71), Expect = 1.9
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
Frame = +2
Query: 149 PPPXSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSXNXGEWGCSTWL-VSS 322
P ++V L + ++ E + L+ D +L N ++G T L V S
Sbjct: 78 PNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPADFGNITSLRVPS 137
Query: 323 ERLWMPDXVLLNXXXXTXGGLRSPXPRYLXTGSXSW 430
E +W+PD VL N TG+ W
Sbjct: 138 EMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHW 173
>X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4
subunit protein.
Length = 451
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 167 IVVNLTLHLRHA-NIRESESTVRIQADLQMNXIDKRLSXNXGEW-GCSTWLVSSERLWMP 340
I + L L L ++ E + + L+ D RL+ N + G + + ++R+W+P
Sbjct: 7 ISIKLQLSLAQLISVNERDEIMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIWLP 66
Query: 341 DXVLLNXXXXT 373
D VL N T
Sbjct: 67 DIVLYNNADGT 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,757,826
Number of Sequences: 237096
Number of extensions: 1333015
Number of successful extensions: 3506
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3473
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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