Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M16
(859 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 43 3e-06
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 43 3e-06
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 41 1e-05
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 39 6e-05
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 39 6e-05
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 24 1.3
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 24 1.8
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 3.1
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 5.4
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 9.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 9.4
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 9.4
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.4
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 43.2 bits (97), Expect = 3e-06
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 403 GDYALRARVSNNGS 444
G + V +NGS
Sbjct: 102 GTFQTNVVVKHNGS 115
Score = 25.0 bits (52), Expect = 0.77
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 488 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
M + +P D Q C KFGS ++ +++D
Sbjct: 130 MDITWFPFDDQHCDMKFGSWTYDGNQLD 157
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 43.2 bits (97), Expect = 3e-06
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 403 GDYALRARVSNNGS 444
G + V +NGS
Sbjct: 102 GTFQTNVVVKHNGS 115
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 503 WPNDMQTCTFKFGSRMHNSDEMD 571
+P D Q C KFGS ++ +++D
Sbjct: 135 FPFDDQHCDMKFGSWTYDGNQLD 157
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 40.7 bits (91), Expect = 1e-05
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 390
++ E + A L + W D L WN E+ G ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSA 96
Score = 25.0 bits (52), Expect = 0.77
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 488 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
M + +P D Q C KFGS ++ +++D
Sbjct: 130 MDITWFPFDDQHCDMKFGSWTYDGNQLD 157
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 38.7 bits (86), Expect = 6e-05
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 390
L + W D L WN E+G L ++ +LW+PDV++ N+A
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSA 96
Score = 25.0 bits (52), Expect = 0.77
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 488 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
M + +P D Q C KFGS ++ +++D
Sbjct: 130 MDITWFPFDDQHCDMKFGSWTYDGNQLD 157
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 38.7 bits (86), Expect = 6e-05
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 390
L + W D L WN E+G L ++ +LW+PDV++ N+A
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSA 96
Score = 25.0 bits (52), Expect = 0.77
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 488 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
M + +P D Q C KFGS ++ +++D
Sbjct: 130 MDITWFPFDDQHCDMKFGSWTYDGNQLD 157
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 471 MSKRFIPGDGAVIRYTGAESVVPGGGC 391
MS ++ DG+VI E VV G GC
Sbjct: 345 MSMLYLGSDGSVILKNYKEMVVVGCGC 371
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -3
Query: 233 MLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQ 87
+++ L C + T +L S GE+R ++ + S + S + +A+
Sbjct: 228 VVSTLSCYLERTELLRSSGETRLFLTHRKPFHPASTQSLSRWIKMVLAE 276
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/56 (21%), Positives = 23/56 (41%)
Frame = +1
Query: 34 SCHKMSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVV 201
+C ++ T + F TC I +CE + +D ++ R+ KI +
Sbjct: 174 ACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 482 ISMQLDNWPND 514
+ M LDNW ND
Sbjct: 295 VEMALDNWKND 305
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 311 QGSGAAALGWCPRN 352
+ S A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 501 LSNCIEIGVLMSKRFIPG 448
L++ +E G+L + R IPG
Sbjct: 156 LADGVERGILTANRMIPG 173
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 501 LSNCIEIGVLMSKRFIPG 448
L++ +E G+L + R IPG
Sbjct: 156 LADGVERGILTANRMIPG 173
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 114 AFCRTSYSTSEEKR*QNNIS 55
A C YST EEK Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,008
Number of Sequences: 336
Number of extensions: 3857
Number of successful extensions: 27
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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