Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M16
(859 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 50 3e-06
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 42 8e-04
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 41 0.001
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 41 0.001
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.005
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 39 0.006
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 38 0.014
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.018
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 37 0.018
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 36 0.042
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.074
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 33 0.30
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 33 0.39
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 32 0.52
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 31 0.91
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.6
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 30 2.1
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.1
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 29 3.7
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 3.7
SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 29 3.7
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.8
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 29 6.4
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_35034| Best HMM Match : ENTH (HMM E-Value=0) 28 8.5
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 303
++ LL Y +D+ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 304 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWD 456
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N V+ D
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHD 146
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 303
+++ L Y +D+ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 304 WNAGEW-GCSTWLVSSERLWRPDVVLLN 384
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +1
Query: 151 LLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 315
L TY++D P D + V L L L ++ + T+ + ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 316 EW-GCSTWLVSSERLWRPDVVLLNAA 390
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +1
Query: 250 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 420
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 421 ---ARVSNNGSVSW 453
V +NG V W
Sbjct: 92 GNPVLVESNGVVRW 105
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 277 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 390
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 205 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 381
LTL+ H ++E ++ L+ W D RL+WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 382 NAAATTAG--DYALRARVSNNGSVSW 453
N+A + +R +++ G V W
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLW 106
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 238 ESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD-- 408
E +++ ++ W + LSWNA E+G S + ++LW+PD+ L N A ++A
Sbjct: 104 EKYELLKLSLYVRQIWKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSL 163
Query: 409 YALRA--RVSNNGSVSW 453
Y +A +VS+ G W
Sbjct: 164 YGFKAKIKVSHTGLNMW 180
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 470 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
++T + + +P D Q+CT KFGS +++ +D
Sbjct: 186 LTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 219
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +1
Query: 250 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 384
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +1
Query: 214 HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 387
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 388 AATTAG---DYALRARVSNNGSVSWD 456
T AG Y S++G+ W+
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWN 191
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 387
+ + W + LSWNA E+ G S VS +R W PD++L N+
Sbjct: 21 IAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNS 60
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 37.9 bits (84), Expect = 0.010
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = +1
Query: 223 HANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NAAAT 396
H + + TV L W D L+WN ++ G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 397 TAGD---YALRARVSNNGSVSW 453
++G+ + + + ++G+V W
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQW 280
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 438
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 439 GSVSW 453
GS+ W
Sbjct: 336 GSIGW 340
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +1
Query: 115 ENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIR---ESESTVRIQADLQM 279
++ L L+ D Y+++ P D + V + + + + E + + ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 280 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 384
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 429
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 430 SNNGSVSW 453
S++GS +W
Sbjct: 86 SSDGSAAW 93
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 36.3 bits (80), Expect = 0.032
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Frame = +1
Query: 232 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----T 396
+ E L+M W D L WN ++G T + + + +W P V++ N A +
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGES 593
Query: 397 TAGDYALRARVSNNGSVSW 453
R V ++G+V W
Sbjct: 594 ITSSNTPRPVVRSDGTVLW 612
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 35.9 bits (79), Expect = 0.042
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 485 SMQLDNWPNDMQTCTFKFGSRMHNSDEM 568
SM L WP D QTC KFGS + S+ M
Sbjct: 200 SMALSRWPFDQQTCAMKFGSLSYGSNLM 227
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 35.1 bits (77), Expect = 0.074
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Frame = +1
Query: 46 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRH 225
M+ + LLPFL S E+ +++ L Y++++ P V+N + +
Sbjct: 1 MAPLLLSLLPFLFVFPSLSVDHTEDVEHR--LLNDLFKDYNKEARP----VLNKSEAI-- 52
Query: 226 ANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAAT 396
E + + + + W++ L+W+ +G T + V+ +W+PD+VL +
Sbjct: 53 ----EVQFDMAYAQLINLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGE 108
Query: 397 TAGDYAL--RARVSNNGSVSW 453
T Y RA + +NG W
Sbjct: 109 TGAIYKFDTRATIMHNGYTEW 129
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 190 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 366
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 367 DVVLLN 384
D+VL N
Sbjct: 127 DIVLYN 132
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG----DYALRARVSN 435
+ + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y +S
Sbjct: 45 VNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISK 104
Query: 436 NGSVSW 453
+GS +W
Sbjct: 105 DGSSAW 110
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 32.3 bits (70), Expect = 0.52
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 283 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSNNGSV 447
W + L WN +G + VS ++W PD+VL NA A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 448 SW 453
W
Sbjct: 100 MW 101
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 32.3 bits (70), Expect = 0.52
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 253 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 390
V + + + W + L+W+ +G T + V R+WRPD++L N A
Sbjct: 69 VSLHQIIDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNA 115
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 31.5 bits (68), Expect = 0.91
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 435
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 436 NGSVSW 453
+G+ +W
Sbjct: 104 SGTNTW 109
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 283 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 378
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 274 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 384
+ W D L W+ + G T + V LW+PD+VL N
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYN 125
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 283 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 384
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 283 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 384
W D L W+ ++ S + +W PDV L+N
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLIN 437
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 470 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
++T + + +P D Q+CT KFGS +++ +D
Sbjct: 33 LTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 66
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 220 RHANIRESEST-VRIQADLQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 384
R+++ ++S++ + + W D L WN G V +W PD+ L+N
Sbjct: 10 RYSSCQDSKAQELTTNLRIYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 255 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 172
HG LG S+S + G+++ D+GVGGGV
Sbjct: 91 HGHLG----SVSMIMGKMNNDYGVGGGV 114
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 255 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 172
HG LG S+S + G+++ D+GVGGGV
Sbjct: 358 HGHLG----SVSMIMGKMNNDYGVGGGV 381
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 29.5 bits (63), Expect = 3.7
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -1
Query: 451 RRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCRSNSFE 272
R +SR H R + R+ L+ + PR S+ T K SP+ R S RS S E
Sbjct: 280 RPKSRLYRHSRSKSKERKTLKSPIRSPRGQSSRERNTKRKSKSPSLERRRSRARRSRSIE 339
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 331 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 441
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 389 LQPPPGTTLSAPVYLITAPSPGIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDE 565
LQ P G + L +A P + L ++TP +LD +++ + TFKFG+ HN +
Sbjct: 855 LQTPGGAVEHS---LASASKPVEQHLVLTTP---KLDTKEHNLPSLTFKFGTSEHNQPQ 907
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 28.7 bits (61), Expect = 6.4
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 114 RKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQ 293
R+ N H R A + SG P R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 294 TTELE 308
+ + E
Sbjct: 484 SRDSE 488
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 256 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 384
+++ + + W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1463 KLKQIVDLQWENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_35034| Best HMM Match : ENTH (HMM E-Value=0)
Length = 455
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/100 (23%), Positives = 37/100 (37%)
Frame = +1
Query: 169 RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSS 348
R P+ K+ H R +N E E +++ L ++ + + WL S+
Sbjct: 193 RSWEPERKVTNTEIEHCRPSNANEEELQLQLALALSKQEAEEHKELDKEKMRDYAWLSST 252
Query: 349 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWDKALG 468
+ P AA A + A VS+ GS W G
Sbjct: 253 PPVADPWGAPQAAAPVAADPWGAPAPVSSAGSNPWSSTNG 292
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 240 LTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVDHE 136
L+++S +G VD FGV +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,594,462
Number of Sequences: 59808
Number of extensions: 504023
Number of successful extensions: 1555
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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