Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M16
(859 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 50 9e-08
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 49 2e-07
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 48 4e-07
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 47 6e-07
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 46 1e-06
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 46 1e-06
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 46 2e-06
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 45 3e-06
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 45 3e-06
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 42 2e-05
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 41 6e-05
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 3.9
AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein. 24 6.8
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 23 9.0
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 50.0 bits (114), Expect = 9e-08
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Frame = +1
Query: 46 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL 219
M T+ L +LL+ + A N + L D LL+ Y++ P ++ V+ + + L
Sbjct: 1 MPTSGETLRAWLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKL 59
Query: 220 RHANIRESESTVRIQAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNA 387
+ + + + +I ++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 60 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNN 119
Query: 388 AATTAGDYAL----RARVSNNGSVSW 453
A G Y + +A V NNG V W
Sbjct: 120 A---DGHYEVTLMTKATVYNNGMVIW 142
Score = 27.1 bits (57), Expect = 0.73
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 485 SMQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 153 SIDVEYFPYDVQTCVLKLGSWTYDGFKVD 181
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 49.2 bits (112), Expect = 2e-07
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 303
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
WN E+G L ++ +LW+PDV++ N+A G Y V NNGS
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGS 135
Score = 24.2 bits (50), Expect = 5.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 503 WPNDMQTCTFKFGSRMHNSDEMD 571
+P D Q C KFGS ++ +++D
Sbjct: 155 FPFDDQHCEMKFGSWTYDGNQLD 177
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 48.0 bits (109), Expect = 4e-07
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Frame = +1
Query: 46 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL 219
M T+ L +LL+ + A N + L D LL+ Y++ P ++ V+ + + L
Sbjct: 1 MPTSGETLRAWLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKL 59
Query: 220 RHANIRESESTVRIQAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-N 384
+ + + + +I ++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 60 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNN 119
Query: 385 AAATTAGDYALRARVSNNGSVSW 453
A A +A + + G V W
Sbjct: 120 ADGNFEVTLATKATIYSEGLVEW 142
Score = 26.2 bits (55), Expect = 1.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 488 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 154 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 181
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 47.2 bits (107), Expect = 6e-07
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Frame = +1
Query: 37 CHKMSTTY--IILLPFLLTCAIASAAECENATSLSLMIDS---LLATYDRDSPPDSKIVV 201
C+K Y II+L + +I A L ++DS L +S P ++
Sbjct: 10 CYKQLRIYKWIIVLMLIANSSILCMAGYNEKRLLHDLLDSYNILERPVVNESDP-LQLSF 68
Query: 202 NLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 378
LTL ++ ++ E + L++ W D L WN E+G L + R+W+PDV++
Sbjct: 69 GLTL-MQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLM 127
Query: 379 LNAA-ATTAGDYALRARVSNNGS 444
N+A G Y V NNGS
Sbjct: 128 YNSADEGFDGTYPTNVVVRNNGS 150
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 46.4 bits (105), Expect = 1e-06
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 303
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
WN E+G L ++ +LW+PDV++ N+A G Y V NNGS
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGS 135
Score = 24.2 bits (50), Expect = 5.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 503 WPNDMQTCTFKFGSRMHNSDEMD 571
+P D Q C KFGS ++ +++D
Sbjct: 155 FPFDDQHCEMKFGSWTYDGNQLD 177
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 46.0 bits (104), Expect = 1e-06
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Frame = +1
Query: 97 ASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTV 255
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 256 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARV 429
+ ++ W D +L W E+G L V S+ +WRPD+VL NA A +A +
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATL 130
Query: 430 SNNGSVSW 453
+ G V W
Sbjct: 131 NYTGRVEW 138
Score = 26.6 bits (56), Expect = 0.97
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 488 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 150 IDVEYFPFDEQTCVMKFGSWTYDGFQVD 177
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 45.6 bits (103), Expect = 2e-06
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +1
Query: 151 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 321
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 322 G-CSTWLVSSERLWRPDVVLL-NAAATTAGDYA-LRARVSNNGSVSW 453
G + +WRPDVVL NA + Y V + G V W
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNAGGSDQHHYGDTNVLVYSEGKVLW 152
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 45.6 bits (103), Expect = 2e-06
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Frame = +1
Query: 139 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKR 297
+ D LL+ Y+R P S ++V L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 298 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 453
W+ E+G T L V SE +W PD+VL N A G+Y + +A + G V W
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYVVTTLTKAILHYTGKVIW 150
Score = 27.5 bits (58), Expect = 0.55
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 503 WPNDMQTCTFKFGSRMHNSDEMD 571
+P D QTC KFGS ++ +++D
Sbjct: 167 FPFDQQTCFMKFGSWTYDGNQID 189
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 44.8 bits (101), Expect = 3e-06
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
L++ W D + WN+ E+G L + RLW+PDV++ N+A G Y V NNGS
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 118
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 44.8 bits (101), Expect = 3e-06
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRESESTVRIQADLQMNWIDKR 297
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 298 LSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 453
L WN ++G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 138
Score = 24.2 bits (50), Expect = 5.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 488 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
+ ++ +P D QTC KFGS ++ +D
Sbjct: 150 IDVEYFPFDEQTCFMKFGSWTYDGYMVD 177
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 42.3 bits (95), Expect = 2e-05
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG 405
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 406 DYALRAR----VSNNGSVSW 453
+Y +R + + NG V W
Sbjct: 122 NYEVRYKSNVLIYPNGEVLW 141
Score = 28.7 bits (61), Expect = 0.24
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +2
Query: 503 WPNDMQTCTFKFGSRMHNSDEMDXXI-*QKNXXXCS---KSGT 619
+P D QTC KFGS N D++ + KN S KSGT
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGT 200
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 40.7 bits (91), Expect = 6e-05
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Frame = +1
Query: 139 MIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQAD-----LQMNWIDKRLS 303
+ D LL+ Y+R P LT+ L + E ++R Q ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWD 456
W+ E+G L V SE++W PD+VL N G+Y + +A + G V W+
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVLYN---NWDGNYEVTLMTKATLKYTGEVFWE 145
Score = 29.1 bits (62), Expect = 0.18
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 488 MQLDNWPNDMQTCTFKFGSRMHNSDEMD 571
M ++ +P D QTC KFGS +N +++
Sbjct: 156 MNVEYFPYDEQTCLMKFGSWTYNGAQVE 183
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 3.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 249 HRANTGRSSNELDRQTTELERRGVGLQHLAGVLG 350
+R+N R++ + DR+ + GVG AGV G
Sbjct: 586 NRSNHHRTTEQADREASVCAAGGVGAAAAAGVGG 619
>AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein.
Length = 441
Score = 23.8 bits (49), Expect = 6.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 346 RTPAKCCSPTPLRSNSVV 293
R P CC+PT L SV+
Sbjct: 400 RVPKPCCAPTKLNPISVL 417
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 23.4 bits (48), Expect = 9.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +2
Query: 392 QPPPGTTLSAPVYLITAPSPGI 457
+PP L+ P YL+ +P G+
Sbjct: 519 EPPHAYELNPPAYLLASPVTGL 540
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,790
Number of Sequences: 2352
Number of extensions: 16455
Number of successful extensions: 66
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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