Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M06
(869 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 234 2e-60
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 91 4e-17
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 84 5e-15
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 75 2e-12
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 71 4e-11
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 64 3e-09
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 61 3e-08
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 61 4e-08
UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep: Pol... 57 5e-07
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 56 9e-07
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 55 3e-06
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 54 5e-06
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 52 1e-05
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 51 3e-05
UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep: Poly... 46 0.001
UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass etched... 46 0.001
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 43 0.012
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 37 0.77
UniRef50_Q9NZ56 Cluster: Formin-2; n=13; Eumetazoa|Rep: Formin-2... 37 0.77
UniRef50_Q6CQ74 Cluster: Similarities with sgd|S0002392 Saccharo... 36 1.0
UniRef50_Q84YU2 Cluster: Putative uncharacterized protein P0045A... 36 1.3
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 36 1.8
UniRef50_A1A5Z7 Cluster: Zgc:158441; n=7; Deuterostomia|Rep: Zgc... 34 4.1
UniRef50_Q2RAC3 Cluster: Harpin-induced protein 1 containing pro... 34 5.4
UniRef50_Q9JL04 Cluster: Formin-2; n=4; Murinae|Rep: Formin-2 - ... 34 5.4
UniRef50_Q6RSS0 Cluster: Peml; n=1; Marmota monax|Rep: Peml - Ma... 33 7.1
UniRef50_UPI0000F30461 Cluster: Formin-2.; n=2; Bos taurus|Rep: ... 33 9.4
UniRef50_Q70E73 Cluster: Ras-associated and pleckstrin homology ... 33 9.4
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 234 bits (573), Expect = 2e-60
Identities = 112/115 (97%), Positives = 114/115 (99%)
Frame = +3
Query: 240 RLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIP 419
RLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIP
Sbjct: 74 RLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIP 133
Query: 420 VTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSP 584
VTVDLCWTTADVTVEG NVLATPSS+RIT+GGLALMHQATLPCDLGYINPIIKSP
Sbjct: 134 VTVDLCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLPCDLGYINPIIKSP 188
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2
Query: 65 PSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDS 163
PSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDS
Sbjct: 16 PSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDS 48
Score = 41.9 bits (94), Expect = 0.020
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 586 IPYTNHPRLNIHFHQS 633
IPYTNHPRLNIHFHQS
Sbjct: 189 IPYTNHPRLNIHFHQS 204
Score = 34.3 bits (75), Expect = 4.1
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +1
Query: 19 MEEIVPLXVSAASAIPXLGQCFLFFQTP 102
MEEIVPL VSAASAIP L F + P
Sbjct: 1 MEEIVPLVVSAASAIPSLVNAFSSSKPP 28
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 90.6 bits (215), Expect = 4e-17
Identities = 45/110 (40%), Positives = 64/110 (58%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ L++D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TV
Sbjct: 68 LPFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTV 127
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIK 578
DLCWT VT +L+ + RI G + LP +L +NP IK
Sbjct: 128 DLCWTIDSVTPARSEILSVFGAQRIAWGSVHFSAPILLPAELSSLNPTIK 177
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 83.8 bits (198), Expect = 5e-15
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ +++DLT ET S+ + S P S+ Y A L +LE VFP PS P++
Sbjct: 71 LPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSF 130
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPNSIHQPP 605
D W ++ V++ G +L+T +R+T GG + + LP DL NP++K S + P
Sbjct: 131 DAHWHSSSVSITGSQILSTYGGTRVTFGGPITSSNPIILPADLRSTNPVVKDTVSYNNTP 190
Query: 606 Q 608
+
Sbjct: 191 K 191
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 75.4 bits (177), Expect = 2e-12
Identities = 40/120 (33%), Positives = 62/120 (51%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ + D+ + + + ++S I YR A L L+A+V P+A S + P+T+
Sbjct: 1820 VPFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITL 1878
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIHQPPQ 608
DL W+T +V + +L +R IGG L H L DL Y+NP+IK S P+
Sbjct: 1879 DLVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSYVDTPK 1938
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 70.9 bits (166), Expect = 4e-11
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +3
Query: 243 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 422
+++PFQ DL G S +T+ S P ++ + YR A +V EAV+FP++ S K PV
Sbjct: 32 MVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNSTSSKNPV 90
Query: 423 TVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQ-ATLPCDLGYINPIIK 578
DL W ++ + +L T +R T+GG +Q + P L +NPIIK
Sbjct: 91 HCDLIWVPSNSSASPKTILQTYGGNRFTVGGPITSNQIISFPLRLDSVNPIIK 143
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ + G+E K+ S + ++ ++ YR A L ++E V P A + P++V
Sbjct: 2034 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2093
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT-LPCDLGYINPIIKSP 584
WT A ++ + + T+GG LM T LP DL +NP++K P
Sbjct: 2094 AVWTIASISPASASETSYYGGRLFTVGGPVLMSSTTHLPADLTRLNPVLKGP 2145
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 61.3 bits (142), Expect = 3e-08
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ F L + S ++ + + P +++ + +R A L L AVV PSA S+ P+TV
Sbjct: 46 PFQ-FEFPLPAGQEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQ 104
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPNSIHQPPQ 608
L W A T +L T +I++GG + A + +L +NP IK S P+
Sbjct: 105 LIWVPASSTTTSSQILGTYGGQQISVGGQVTNSSPAKVSANLLMMNPHIKDSTSYTDTPK 164
Query: 609 -T*HPFPSIP 635
+ P++P
Sbjct: 165 LLVYSTPAVP 174
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 60.9 bits (141), Expect = 4e-08
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ L GT S+SV++ + VSS+ YR A L +L A + P+ S P TV
Sbjct: 37 LPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTV 95
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKS 581
L W + T ++L IGG + + ++PC+L +NP+IKS
Sbjct: 96 SLVWVPFNSTATSSDILNVFGGQSFCIGGAVNSLAAISVPCNLTNVNPVIKS 147
>UniRef50_Q91TW9 Cluster: Polyprotein; n=25; Marafivirus|Rep:
Polyprotein - Maize rayado fino virus
Length = 2027
Score = 57.2 bits (132), Expect = 5e-07
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 5/160 (3%)
Frame = +3
Query: 243 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 422
L +PFQ D TG + + + ++++ YR A L+ +E V P PS P+
Sbjct: 1866 LDLPFQWKVTDFTGYAAYHGTDDLVASAVLTTLCAPYRHAELLYVEISVAPCPPSFSKPI 1925
Query: 423 TVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT-LPCDLGYINPIIKSPNSIHQ 599
+ WT A ++ +IT+GG ++ T +P DL +NP IKS S +
Sbjct: 1926 MFTVVWTPATLSPRDGKETDYYGGRQITVGGPVMLSSTTAVPADLARMNPFIKSSVSYND 1985
Query: 600 PPQT*HPFPSI----PLTPXXKXFXPGLKXLRLSSEGSHP 707
P+ P++ P F G+ +R S + P
Sbjct: 1986 TPRWTMSVPAVTGGDTKIPLATAFVRGIVRVRAPSGAATP 2025
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 56.4 bits (130), Expect = 9e-07
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 249 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 428
+PFQ G K + + ++S + GYR A L++ E P A + P++V
Sbjct: 1908 VPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISV 1967
Query: 429 DLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQAT-LPCDLGYINPIIKS 581
WT A + L +T+GG LM T +P DL +NP+IK+
Sbjct: 1968 TAVWTIASIAPATTTELQYYGGRLLTLGGPVLMGSVTRIPADLTRLNPVIKT 2019
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 54.8 bits (126), Expect = 3e-06
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 306 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLAT 485
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 486 PSSSRITIGGLALMHQA-TLPCDLGYINPIIKSPNSIHQPPQ 608
R IGG Q +PC+L +N +IK P+
Sbjct: 112 YGGQRFLIGGTLTTSQVIRVPCNLQSVNAMIKDSTIYTDSPK 153
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 54.0 bits (124), Expect = 5e-06
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +3
Query: 243 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 422
++ PFQ L G E ++ V++ + +++ YR A L +L+A++ P+ + P
Sbjct: 31 IVYPFQFTIASL-GVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPT 89
Query: 423 TVDLCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPNSIHQ 599
+V L W + T +L +GG + +PC L INPIIK +
Sbjct: 90 SVALAWVPYNSTATAAKILDVFGGQEFCVGGSINSTSPIIVPCPLTNINPIIKDSVTYTD 149
Query: 600 PPQ 608
P+
Sbjct: 150 TPK 152
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 52.4 bits (120), Expect = 1e-05
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 1/110 (0%)
Frame = +3
Query: 252 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 431
PFQ GT+ S+T+ ++ +VS++ YR A L +L + P+ + P TV
Sbjct: 34 PFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVG 92
Query: 432 LCWTTADVTVEGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIK 578
+CW A+ V + T IGG + + + C L +NP +K
Sbjct: 93 VCWVPANSPVTPAQITKTYGGQIFCIGGAINTLSPLIVKCPLEMMNPRVK 142
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +3
Query: 282 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 461
G + S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+
Sbjct: 44 GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPA 103
Query: 462 EGVNVLATPSSSRITIGG-LALMHQATLPCDLGYINPIIKSPNSIHQPPQ 608
++L S T GG + LP + +N ++K S P+
Sbjct: 104 SPTDILKIYGGSSYTFGGAINSTRPIELPLPINSVNDMLKDSVSYLDTPK 153
>UniRef50_Q0IKR9 Cluster: Polyprotein; n=8; Tymoviridae|Rep:
Polyprotein - Grapevine rupestris vein feathering virus
Length = 2068
Score = 46.4 bits (105), Expect = 0.001
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +3
Query: 243 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 422
L IPFQ + + +++ + + + + + + +R + LE V+ P+ + PV
Sbjct: 1912 LTIPFQWVAL-IIKSDSAAFTADLAASTTLKKLTDPFRSCEITQLEVVLMPTLNAFNNPV 1970
Query: 423 TVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQ-ATLPCDLGYINPIIKS 581
T+ W + + L IT GG M+ AT+P DL INP IKS
Sbjct: 1971 TLHCVWRVNSIQPASGDELLYYGGQAITAGGPVSMNALATVPADLTRINPRIKS 2024
>UniRef50_Q8V0G9 Cluster: Coat protein; n=1; Bermuda grass
etched-line virus|Rep: Coat protein - Bermuda grass
etched-line virus
Length = 195
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +3
Query: 291 TKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGV 470
TK + + + ++ + YR A L++ E + P S P+ WT A ++
Sbjct: 52 TKHKTDDLSAFTTLAKLTVVYRHAELIHAEVELTPCPGSFSKPLMFLFVWTPASLSPATG 111
Query: 471 NVLATPSSSRITIGGLALMHQAT-LPCDLGYINPIIKSPNSIHQPPQ 608
+ +IT+GG ++ T +P DL +NP+IKS S + P+
Sbjct: 112 WETSYYGGRQITVGGPVMLSSTTVIPADLSRMNPVIKSSVSYNDCPR 158
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 42.7 bits (96), Expect = 0.012
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Frame = +3
Query: 243 LIIPFQRLYFDLT--GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+++PFQ F+ T GT + V++Q+ ++ + YR A +V +A++ P+ ++
Sbjct: 32 IVLPFQ---FEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSN 88
Query: 417 PVTVDLCWTTADVTVEGVNVL---ATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPN 587
P+TV L W A+ +L S + G ++ +P +L +N ++K
Sbjct: 89 PLTVYLAWVPANSPATPTQILKLRVYGGQSFVLGGAISAAKTIEVPLNLDSVNRMLKDSV 148
Query: 588 SIHQPPQ 608
+ P+
Sbjct: 149 TYTDTPK 155
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 36.7 bits (81), Expect = 0.77
Identities = 23/89 (25%), Positives = 36/89 (40%)
Frame = +3
Query: 273 DLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTAD 452
DLT T T + + + A + A++ P+A +L +P DL T D
Sbjct: 515 DLTTTATDLTTTATDLTTTATDLTVPTVTALMETATALMVPTATALMVPTATDLTTTATD 574
Query: 453 VTVEGVNVLATPSSSRITIGGLALMHQAT 539
+T T + + +T ALM AT
Sbjct: 575 LTTTATATDLTTTVTDLTTTATALMETAT 603
Score = 33.9 bits (74), Expect = 5.4
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +3
Query: 297 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 476
+ + T ++P V+++++ + A++ P+A L +P DL T D+T +
Sbjct: 662 TTTATDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATAL 721
Query: 477 LATPSSSRITIGGLALMHQAT 539
+ T ++ + ALM AT
Sbjct: 722 METATALTVPT-ATALMETAT 741
>UniRef50_Q9NZ56 Cluster: Formin-2; n=13; Eumetazoa|Rep: Formin-2 -
Homo sapiens (Human)
Length = 1865
Score = 36.7 bits (81), Expect = 0.77
Identities = 31/94 (32%), Positives = 34/94 (36%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L + I PP L G AG+ PP LP G
Sbjct: 1221 PPLPGAGIPPPPPLPGAGIPPPPPLPGVGI-PPPPPLPG--AGIPPPPP----LPGAGIP 1273
Query: 719 XPPPFXGAWAKXGFGPPXIFXX*NXXNPPSXXAA 820
PPP GA G PP PP A
Sbjct: 1274 PPPPLPGA----GIPPPPPLPRVGIPPPPPLPGA 1303
Score = 36.3 bits (80), Expect = 1.0
Identities = 31/94 (32%), Positives = 33/94 (35%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L I PP L G AG+ PP LP G
Sbjct: 1089 PPLPGAAIPPPPPLPGAGIPLPPPLPGAGI-PPPPPLPG--AGIPPPPP----LPGAGIP 1141
Query: 719 XPPPFXGAWAKXGFGPPXIFXX*NXXNPPSXXAA 820
PPP GA G PP PP A
Sbjct: 1142 PPPPLPGA----GIPPPPPLPGAGIPPPPPLPGA 1171
Score = 35.1 bits (77), Expect = 2.3
Identities = 31/94 (32%), Positives = 33/94 (35%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L I PP L G AG+ PP LP G
Sbjct: 1144 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGI-PPPPPLPG--AGIPPPPP----LPGAGIP 1196
Query: 719 XPPPFXGAWAKXGFGPPXIFXX*NXXNPPSXXAA 820
PPP GA G PP PP A
Sbjct: 1197 PPPPLPGA----GIPPPPPLPGAGIPPPPPLPGA 1226
Score = 35.1 bits (77), Expect = 2.3
Identities = 31/94 (32%), Positives = 33/94 (35%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L I PP L G AG+ PP LP G
Sbjct: 1199 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGI-PPPPPLPG--AGIPPPPP----LPGVGIP 1251
Query: 719 XPPPFXGAWAKXGFGPPXIFXX*NXXNPPSXXAA 820
PPP GA G PP PP A
Sbjct: 1252 PPPPLPGA----GIPPPPPLPGAGIPPPPPLPGA 1281
Score = 34.3 bits (75), Expect = 4.1
Identities = 27/77 (35%), Positives = 29/77 (37%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L I PP L G AG+ PP LP G
Sbjct: 1276 PPLPGAGIPPPPPLPRVGIPPPPPLPGAGI-PPPPPLPG--AGIPPPPP----LPGVGIP 1328
Query: 719 XPPPFXGAWAKXGFGPP 769
PPP G G PP
Sbjct: 1329 PPPPLPGV----GIPPP 1341
Score = 34.3 bits (75), Expect = 4.1
Identities = 25/77 (32%), Positives = 28/77 (36%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L + I PP L G G+ PP LP G
Sbjct: 1298 PPLPGAGIPPPPPLPGAGIPPPPPLPGVGI-PPPPPLPG--VGIPPPPP----LPGAGIP 1350
Query: 719 XPPPFXGAWAKXGFGPP 769
PPP G PP
Sbjct: 1351 PPPPLPGMGIPPAPAPP 1367
>UniRef50_Q6CQ74 Cluster: Similarities with sgd|S0002392
Saccharomyces cerevisiae YDL233w hypothetical protein;
n=1; Kluyveromyces lactis|Rep: Similarities with
sgd|S0002392 Saccharomyces cerevisiae YDL233w
hypothetical protein - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 707
Score = 36.3 bits (80), Expect = 1.0
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +2
Query: 491 ILSHYYWRSRPYASSHP-PLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAG 667
+ SH + S+P +SHP P S Q Q+P H P P + ++ N +A L G G
Sbjct: 267 LASHPHPLSQPQHNSHPHPHNSHQQQQQQQVPPTHPPPHP-MHGMAPNLGNAPLIGQNPG 325
Query: 668 VKXPPXVI---RGLPSXGXSXPP 727
P ++ R +PS S P
Sbjct: 326 ASPNPALLGLNRAIPSQISSTYP 348
>UniRef50_Q84YU2 Cluster: Putative uncharacterized protein
P0045A07.118; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0045A07.118 - Oryza sativa subsp. japonica (Rice)
Length = 213
Score = 35.9 bits (79), Expect = 1.3
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +2
Query: 509 WRSRPYASSHPPLRSR-LHQPDHQIPEFHTPTTPDLTSISI---NPPDAXL-XGXRAGVK 673
W SRP H LR+R +H+P H+ TP+ P+ + +S +PPDA L R ++
Sbjct: 134 WSSRP---RHRRLRARRIHRPCHRCRRDKTPSPPNPSPVSSSPPSPPDALLDPPPRHELR 190
Query: 674 XPPXVIRGLPSXGXSXPPP 730
RGL PPP
Sbjct: 191 RSRAPRRGLVDAATRGPPP 209
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 35.5 bits (78), Expect = 1.8
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 327 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRI 503
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S SR+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_A1A5Z7 Cluster: Zgc:158441; n=7; Deuterostomia|Rep:
Zgc:158441 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 917
Score = 34.3 bits (75), Expect = 4.1
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = +3
Query: 246 IIPFQRLYFDLTGTETKSNSVT--VQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIP 419
II Q + DL+ T + + LP++ +I + V+ A+ PS PSL+
Sbjct: 708 IIKLQPVTLDLSWTPVSKKQLAWLIHHLPSLKDLIMSGCSSLCVS--ALSSPSCPSLR-- 763
Query: 420 VTVDLCWTTADVTVEGVNVLATP-SSSRITIGGLALMHQATLPCDLGYINPIIKSPNSIH 596
T+DLCW + +++ P S SR + L + + L I +++ S+
Sbjct: 764 -TLDLCWAVGVKDSQIKDLIVQPGSESRSRLRSLVSLRLSGLELSDAVIKTMVRHMPSLR 822
Query: 597 Q 599
Q
Sbjct: 823 Q 823
>UniRef50_Q2RAC3 Cluster: Harpin-induced protein 1 containing
protein, expressed; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Harpin-induced protein 1 containing
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 342
Score = 33.9 bits (74), Expect = 5.4
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = +2
Query: 491 ILSHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXR--A 664
+L HY+ A+ HP S H PDH P+ P P + + +PP A
Sbjct: 30 LLPHYHHSGDSAAAMHPSSSSS-HPPDHPNPKSPPPPAPAMGYPANHPPPPPSSNAAYFA 88
Query: 665 GVKXPPXVIRGLPSXGXSXPPP 730
PP G + + P P
Sbjct: 89 SAAPPPAATNGTAAFAVAYPYP 110
>UniRef50_Q9JL04 Cluster: Formin-2; n=4; Murinae|Rep: Formin-2 - Mus
musculus (Mouse)
Length = 1567
Score = 33.9 bits (74), Expect = 5.4
Identities = 26/77 (33%), Positives = 29/77 (37%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L + I PP L G G+ PP LP G
Sbjct: 925 PPLPGMGIPPPPPLPGMGIPPPPPLPGVGI-PPPPPLPG--VGIPPPPP----LPGVGIP 977
Query: 719 XPPPFXGAWAKXGFGPP 769
PPP G G PP
Sbjct: 978 PPPPLPGV----GIPPP 990
Score = 33.1 bits (72), Expect = 9.4
Identities = 26/77 (33%), Positives = 29/77 (37%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L + I PP L G G+ PP LP G
Sbjct: 914 PPLPGMGIPPPPPLPGMGIPPPPPLPGMGI-PPPPPLPG--VGIPPPPP----LPGVGIP 966
Query: 719 XPPPFXGAWAKXGFGPP 769
PPP G G PP
Sbjct: 967 PPPPLPGV----GIPPP 979
>UniRef50_Q6RSS0 Cluster: Peml; n=1; Marmota monax|Rep: Peml -
Marmota monax (Woodchuck)
Length = 142
Score = 33.5 bits (73), Expect = 7.1
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 552 LGYINPIIKSPNSIHQPPQT*HPFPSIPLTPXXKXFXPGLKXLRLSS 692
L Y+ P+I+ P+ IH PP T PFP + L P F P L L+S
Sbjct: 81 LMYLPPLIRLPHLIHLPPLT--PFPHLFL-PPLPLFLPPLPPFGLAS 124
>UniRef50_UPI0000F30461 Cluster: Formin-2.; n=2; Bos taurus|Rep:
Formin-2. - Bos Taurus
Length = 1349
Score = 33.1 bits (72), Expect = 9.4
Identities = 26/79 (32%), Positives = 30/79 (37%)
Frame = +2
Query: 539 PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
PPL P +P P P L + I PP L G G+ PP LP G
Sbjct: 889 PPLPGVGIPPAPPLPGVGIPPAPPLPGVGI-PPPPPLPG--VGIPPPPP----LPGVGIP 941
Query: 719 XPPPFXGAWAKXGFGPPXI 775
PPP G G PP +
Sbjct: 942 PPPPLPGV----GIPPPSL 956
>UniRef50_Q70E73 Cluster: Ras-associated and pleckstrin homology
domains-containing protein 1; n=21; Amniota|Rep:
Ras-associated and pleckstrin homology domains-containing
protein 1 - Homo sapiens (Human)
Length = 1302
Score = 33.1 bits (72), Expect = 9.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 50 PLRPFPSLVNAFSSSKPPQTDNPSARSMDMQPLPSS 157
PL P PS+V +S PP P+ S ++P+P++
Sbjct: 906 PLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPAN 941
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,239,037
Number of Sequences: 1657284
Number of extensions: 15896023
Number of successful extensions: 50596
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 45884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50463
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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