Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M06
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.4
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.9
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.3
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.3
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 224 GTVSSTFDHPFSTPVLRSYWHRNQ 295
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +2
Query: 581 PEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXSXPPPFXGAWAKXGF 760
P +P P S P RAG PP RG P G PP G+ G
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 326
Query: 761 GPP 769
G P
Sbjct: 327 GSP 329
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +2
Query: 581 PEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXSXPPPFXGAWAKXGF 760
P +P P S P RAG PP RG P G PP G+ G
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 347
Query: 761 GPP 769
G P
Sbjct: 348 GSP 350
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/63 (31%), Positives = 22/63 (34%)
Frame = +2
Query: 581 PEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXSXPPPFXGAWAKXGF 760
P +P P S P RAG PP RG P G PP G+ G
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 332
Query: 761 GPP 769
G P
Sbjct: 333 GSP 335
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 359
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 227 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 391
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 392 SFRP*PQNTSHS 427
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,279,155
Number of Sequences: 27780
Number of extensions: 363870
Number of successful extensions: 1213
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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