Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_M06
(869 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 39 0.005
At5g46310.1 68418.m05701 WRKY family transcription factor identi... 31 0.76
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 1.3
At2g25900.1 68415.m03108 zinc finger (CCCH-type) family protein ... 30 1.7
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 29 3.1
At5g14220.1 68418.m01661 protoporphyrinogen oxidase, putative si... 29 4.0
At3g18360.1 68416.m02335 VQ motif-containing protein contains PF... 29 4.0
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 29 4.0
At1g61080.1 68414.m06877 proline-rich family protein 29 4.0
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 5.3
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 29 5.3
At1g50090.1 68414.m05619 aminotransferase class IV family protei... 28 7.1
At4g39050.1 68417.m05531 kinesin-related protein (MKRP2) kinesin... 28 9.3
At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1 (MSH... 28 9.3
At3g63070.1 68416.m07084 PWWP domain-containing protein putative... 28 9.3
At2g42780.1 68415.m05297 expressed protein 28 9.3
At1g23540.1 68414.m02960 protein kinase family protein contains ... 28 9.3
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 521 PYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXR-AGVKXPPXVIRG 697
P S+ PL + LHQP ++ P P P L S SI PP A R PP R
Sbjct: 553 PSFSNRDPLTT-LHQPINKTPPPPPPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRS 611
Query: 698 LPSXGXSXPPP 730
+PS PPP
Sbjct: 612 IPSPSAPPPPP 622
>At5g46310.1 68418.m05701 WRKY family transcription factor identical
to WRKY transcription factor 8 GI:15384212 from
[Arabidopsis thaliana]
Length = 372
Score = 31.5 bits (68), Expect = 0.76
Identities = 21/74 (28%), Positives = 33/74 (44%)
Frame = +2
Query: 509 WRSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXV 688
W S PY H P++ ++ Q Q+ T P +T + N + + G G+ P V
Sbjct: 279 WLSLPYPYHHYPIKYQIMQSSIQMQHSGIGTEPLVTFVGQNRLNQPIGGI-VGLSEFPQV 337
Query: 689 IRGLPSXGXSXPPP 730
I+ L S + P P
Sbjct: 338 IQELYSLPNAPPLP 351
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +2
Query: 521 PYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGL 700
PY +S P++ R QP E T+P + PP + V PP +
Sbjct: 613 PYDAS--PIKKRRPQPPSPSTEETKTTSPQSPPVHSPPPPPPVHSPPPPVFSPPPPMHSP 670
Query: 701 PSXGXSXPPP 730
P S PPP
Sbjct: 671 PPPVYSPPPP 680
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/85 (25%), Positives = 29/85 (34%), Gaps = 2/85 (2%)
Frame = +2
Query: 521 PYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSIS--INPPDAXLXGXRAGVKXPPXVIR 694
P S PP+ S P H+P P + S ++ P + V PP +
Sbjct: 659 PVFSPPPPMHSPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVH 718
Query: 695 GLPSXGXSXPPPFXGAWAKXGFGPP 769
P S PPP F PP
Sbjct: 719 SPPPPVHSPPPPVQSPPPPPVFSPP 743
>At2g25900.1 68415.m03108 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 315
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 540 LPC----DLGYINPIIKSPNSIHQPPQT*HPFPSIPLTPXXKXFXPGLKXLRLSSEG 698
LPC DLG+ + + SP SI P P S PL+P ++ ++L+ G
Sbjct: 194 LPCSLDPDLGFFSGLATSPTSILVSPSFSPPSESPPLSPSTGELIASMRKMQLNGGG 250
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/91 (24%), Positives = 33/91 (36%)
Frame = +2
Query: 497 SHYYWRSRPYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKX 676
S Y ++S PY S PP + P + + + +PP + K
Sbjct: 77 SPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYV-----YKS 131
Query: 677 PPXVIRGLPSXGXSXPPPFXGAWAKXGFGPP 769
PP V P S PPP+ + + PP
Sbjct: 132 PPYVYSSPPPYVYSSPPPYAYSPPPYAYSPP 162
>At5g14220.1 68418.m01661 protoporphyrinogen oxidase, putative
similar to protoporphyrinogen IX oxidase, mitochondrial
(PPO II) from Nicotiana tabacum [SP|O24164], Glycine
max, AB025102, Spinacia oleracea [GI:14349153]; contains
Pfam amine oxidase, flavin-containing domain [PF015930]
Length = 508
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 479 GHPFILSHYYWRSR-P-YASSHPPLRSRLHQPDHQIPEF 589
G P ++HYYWR P Y SS+ + + + ++ +P F
Sbjct: 427 GEPVSVNHYYWRKAFPLYDSSYDSVMEAIDKMENDLPGF 465
>At3g18360.1 68416.m02335 VQ motif-containing protein contains
PF05678: VQ motif
Length = 285
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 532 KPPSPAISATSTRSSNPRIPYTNHPRLNIH 621
KPPSP+ +++ + +P I YT+ PR+ IH
Sbjct: 57 KPPSPSSFSSAAKPRHPVIIYTHTPRI-IH 85
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Frame = +2
Query: 527 ASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISI-------NPPDAXLXGXRAGVKXPPX 685
++SH + + HQP Q+ + P SI++ +PP G PP
Sbjct: 214 STSHSVIHNEDHQPPPQVKQSEPTPPPPPPSIAVKQSAPTPSPPPPIKKGSSPSPPPPPP 273
Query: 686 VIR-GLPSXGXSXPPP 730
V + G S S PPP
Sbjct: 274 VKKVGALSSSASKPPP 289
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +2
Query: 596 PTTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXSXPPPFXGAWAKXGFGPP 769
P P + + + +PP + +G PP L + PPP A A GPP
Sbjct: 565 PPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPPPPPPPMAMANGAAGPP 622
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 512 RSRPYASSH-PPLRSRLHQPDHQIPEFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPXV 688
RS P H PP S +H P P ++P P PP V PP
Sbjct: 491 RSPPPPPVHSPPPPSPIHSPPP--PPVYSPPPPPPVYSPPPPPPVYSPPPPPPVHSPPPP 548
Query: 689 IRGLPSXGXSXPPP 730
+ P S PPP
Sbjct: 549 VHSPPPPVHSPPPP 562
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 3/88 (3%)
Frame = +2
Query: 515 SRPYASSHPPLRSRLHQPDHQIP---EFHTPTTPDLTSISINPPDAXLXGXRAGVKXPPX 685
S P ++ +PP S P +P E + P +S + NPP + PP
Sbjct: 145 SNPNSNPNPPESSSNPNPPVTVPNPPESSSNPNPPESSSNPNPPITIPYPPESSSPNPPE 204
Query: 686 VIRGLPSXGXSXPPPFXGAWAKXGFGPP 769
++ P G + P +++ G P
Sbjct: 205 IVPSPPESGYTPGPVLGPPYSEPGPSTP 232
>At1g50090.1 68414.m05619 aminotransferase class IV family protein
contains Pfam profile: PF01063 aminotransferase class IV
Length = 367
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 312 VQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPS 491
V+S N S ++K +A V+F A + K V C ++ + N+++TP
Sbjct: 201 VKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEEVSTC----NIFILKGNIVSTPP 256
Query: 492 SSRITIGGLALMHQATLPCDLGY 560
+S + G+ L D+GY
Sbjct: 257 TSGTILPGITRKSICELARDIGY 279
>At4g39050.1 68417.m05531 kinesin-related protein (MKRP2) kinesin
motor protein - Ustilago maydis, PID:g2062750; identical
to cDNA MKRP2 mRNA for kinesin-related protein
GI:16902293, kinesin-related protein [Arabidopsis
thaliana] GI:16902294
Length = 1055
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 532 KPPSPAISATSTRSSNPRIPYTN 600
+PPSPA S +S+ SN IP +N
Sbjct: 12 RPPSPASSTSSSHLSNRLIPRSN 34
>At4g02070.1 68417.m00277 DNA mismatch repair protein MSH6-1
(MSH6-1) (AGAA.3) identical to SP|O04716 DNA mismatch
repair protein MSH6-1 (AtMsh6-1) cress] {Arabidopsis
thaliana}
Length = 1324
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 315 QSLPNVSSIIKGYRDAY 365
QSLPN+SS IK ++DA+
Sbjct: 854 QSLPNISSSIKYFKDAF 870
>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
transcription factor HUA2, Arabidopsis thaliana,
EMBL:AF116556
Length = 1347
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 509 WRSRPYASSHPPLRSRLHQPDHQIPEFH 592
++ RPY SSHPP H + P+ H
Sbjct: 1201 FQHRPYPSSHPPPPPPSHHYSYMEPDHH 1228
>At2g42780.1 68415.m05297 expressed protein
Length = 293
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 599 TTPDLTSISINPPDAXLXGXRAGVKXPPXVIRGLPSXGXS 718
+ P T +S N P G K PP I GLP S
Sbjct: 241 SAPKRTGLSANAPSTSRSVPSGGQKLPPRRINGLPGTAPS 280
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 53 LRPFPSLVNAFSSSKPPQTD-NPSARSMDMQPLPSSDSS 166
L P PS++ + S PP +D +P S P P+S+ S
Sbjct: 64 LPPLPSILPPLTDSPPPPSDSSPPVDSTPSPPPPTSNES 102
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,813,627
Number of Sequences: 28952
Number of extensions: 366587
Number of successful extensions: 1129
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2038669600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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