Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_M04
         (858 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat...    30   9.4  
AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein.     30   9.4  
AB032974-1|BAA86462.2|  543|Homo sapiens KIAA1148 protein protein.     30   9.4  

>AJ278120-1|CAB92314.1| 1101|Homo sapiens putative ankyrin-repeat
           containing protein protein.
          Length = 1101

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = +3

Query: 495 VLDXPSSSXIXXGXSRTYASSHPPLXSRIHQXDHXIPDSIH-QPSQT*XP--FXSXPCTP 665
           V D  SSS +     +TY S+ P L S  HQ  H  P   H  P+       F   P   
Sbjct: 576 VFDFRSSSSVGSPTRQTYQSTSPAL-SPTHQNSHYRPSPPHTSPAHQGGSYRFSPPPVGG 634

Query: 666 YXKEFXPGXXPSXVXQRLXQXXSPP 740
             KE+ P   PS + +      SPP
Sbjct: 635 QGKEY-PSPPPSPLRRGPQYRASPP 658


>AB046856-1|BAB13462.2| 1864|Homo sapiens KIAA1636 protein protein.
          Length = 1864

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = +3

Query: 495  VLDXPSSSXIXXGXSRTYASSHPPLXSRIHQXDHXIPDSIH-QPSQT*XP--FXSXPCTP 665
            V D  SSS +     +TY S+ P L S  HQ  H  P   H  P+       F   P   
Sbjct: 1339 VFDFRSSSSVGSPTRQTYQSTSPAL-SPTHQNSHYRPSPPHTSPAHQGGSYRFSPPPVGG 1397

Query: 666  YXKEFXPGXXPSXVXQRLXQXXSPP 740
              KE+ P   PS + +      SPP
Sbjct: 1398 QGKEY-PSPPPSPLRRGPQYRASPP 1421


>AB032974-1|BAA86462.2|  543|Homo sapiens KIAA1148 protein protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = +3

Query: 495 VLDXPSSSXIXXGXSRTYASSHPPLXSRIHQXDHXIPDSIH-QPSQT*XP--FXSXPCTP 665
           V D  SSS +     +TY S+ P L S  HQ  H  P   H  P+       F   P   
Sbjct: 18  VFDFRSSSSVGSPTRQTYQSTSPAL-SPTHQNSHYRPSPPHTSPAHQGGSYRFSPPPVGG 76

Query: 666 YXKEFXPGXXPSXVXQRLXQXXSPP 740
             KE+ P   PS + +      SPP
Sbjct: 77  QGKEY-PSPPPSPLRRGPQYRASPP 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,298,356
Number of Sequences: 237096
Number of extensions: 670033
Number of successful extensions: 523
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)