Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L24
         (906 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55EDD Cluster: PREDICTED: similar to CG11822-PA...    36   1.4  
UniRef50_A4X2H8 Cluster: Beta-ketoacyl synthase; n=1; Salinispor...    35   3.3  
UniRef50_Q4PGJ9 Cluster: Putative uncharacterized protein; n=1; ...    34   4.3  
UniRef50_A6W6S5 Cluster: Diguanylate cyclase/phosphodiesterase; ...    34   5.7  

>UniRef50_UPI0000D55EDD Cluster: PREDICTED: similar to CG11822-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG11822-PA, isoform A - Tribolium castaneum
          Length = 438

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = +1

Query: 118 NATSLSLMIDSLLATYDRESPP-----DSKIVVNLTLHLRHANIRESESTVRILADLQMN 282
           N+T    +   LL  YD+ + P      +K+V  LT+  RH  + E +ST+ + + ++++
Sbjct: 36  NSTVTDKLRQDLLLNYDKFARPAQHYNTTKVVFGLTI--RHIELNEFKSTLVVHSWIRLS 93

Query: 283 WIDKRLSXNAGELG 324
           W D++L  N+   G
Sbjct: 94  WKDEKLQWNSTNYG 107


>UniRef50_A4X2H8 Cluster: Beta-ketoacyl synthase; n=1; Salinispora
           tropica CNB-440|Rep: Beta-ketoacyl synthase -
           Salinispora tropica CNB-440
          Length = 1951

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 25/90 (27%), Positives = 43/90 (47%)
 Frame = +1

Query: 97  ASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQ 276
           A+    + A   + +I ++LA Y R  PP +        H  H  +RE+++T+R+L D  
Sbjct: 380 ANIGHTKAAAGAAALIKTVLAVYHRTLPPTTGC------HTPHPLLREADATLRVL-DEP 432

Query: 277 MNWIDKRLSXNAGELGLQHWXVXSGTLVEG 366
             W  +RL+     +G     + S  +VEG
Sbjct: 433 EPWRGERLTAGVSAMGF--GGINSHVVVEG 460


>UniRef50_Q4PGJ9 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 979

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -1

Query: 420 VXPPAGXXQPRXXX*PPSALHKRSRXHXPVLQPQFPCVPTQSFVDP 283
           V PPA    P       +++H++   H P+ QP +P  P  SF DP
Sbjct: 114 VQPPAYQGHPTMD----ASMHQQHALHHPISQPMYPFQPQHSFYDP 155


>UniRef50_A6W6S5 Cluster: Diguanylate cyclase/phosphodiesterase;
           n=1; Kineococcus radiotolerans SRS30216|Rep: Diguanylate
           cyclase/phosphodiesterase - Kineococcus radiotolerans
           SRS30216
          Length = 770

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +1

Query: 58  YIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESP-PDSKIVVNLTLHLRHANI 234
           + ++LP +LT  +          +L L++ S +ATY R  P P   + V +   L  AN+
Sbjct: 28  FAVMLPQVLTADLPVGRRVVGVAALVLLVASAIATYRRRRPLPLDVLFVPVLTVLVGANL 87

Query: 235 RESESTVRILADL 273
             S +T+ I  D+
Sbjct: 88  ANSMATMSIYLDV 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,301,031
Number of Sequences: 1657284
Number of extensions: 8493078
Number of successful extensions: 18632
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18622
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)