Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L24
         (906 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67737-1|CAA91536.2|  399|Caenorhabditis elegans Hypothetical pr...    31   0.86 
AL110479-15|CAB54361.2|  400|Caenorhabditis elegans Hypothetical...    31   0.86 
AC024783-1|AAY86294.1|  404|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z67737-5|CAA91541.2|  401|Caenorhabditis elegans Hypothetical pr...    29   6.0  
U10401-10|AAA19062.2|  476|Caenorhabditis elegans Hypothetical p...    28   8.0  

>Z67737-1|CAA91536.2|  399|Caenorhabditis elegans Hypothetical
           protein T01H10.1 protein.
          Length = 399

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
 Frame = +1

Query: 142 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 300
           +  + A +D   P    PD+    N TL   +L+   + E E  V ++ +L   W D RL
Sbjct: 50  VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109

Query: 301 SXNAGE 318
           S NA +
Sbjct: 110 SWNASD 115


>AL110479-15|CAB54361.2|  400|Caenorhabditis elegans Hypothetical
           protein Y105C5B.16 protein.
          Length = 400

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 163 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNA 312
           YD E+P      + L  +L+   ++E +  + ++ ++   W D RLS NA
Sbjct: 64  YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112


>AC024783-1|AAY86294.1|  404|Caenorhabditis elegans Hypothetical
           protein Y45G5AL.2 protein.
          Length = 404

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 178 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSXNAGELG 324
           PP  +I + L++ ++   + E E     L D + +W D RLS +  + G
Sbjct: 79  PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYG 126


>Z67737-5|CAA91541.2|  401|Caenorhabditis elegans Hypothetical
           protein T01H10.6 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 205 LTLHLRHANIRESESTVRILADLQMNWIDKRLSXNA 312
           L  +L+   ++E E  V ++ +L   W D RLS N+
Sbjct: 79  LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114


>U10401-10|AAA19062.2|  476|Caenorhabditis elegans Hypothetical
           protein T20B12.9 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +1

Query: 109 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 282
           E  +  +L  +ID+LL  YD    P+++  VN+T+ L    +   SE T     D+  + 
Sbjct: 9   EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67

Query: 283 -WIDKRLS 303
            W D RLS
Sbjct: 68  IWQDPRLS 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,857,775
Number of Sequences: 27780
Number of extensions: 198564
Number of successful extensions: 490
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)