Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L22
(884 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 57 2e-10
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 56 5e-10
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 55 9e-10
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 53 3e-09
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 53 3e-09
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 44 2e-06
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 26 0.34
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 23 4.2
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 23 4.2
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.4
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 57.2 bits (132), Expect = 2e-10
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = +3
Query: 153 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 329
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 330 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 506
+LW+PDV++ N+A G + V +NGS ++ + M + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDDQHC 142
Query: 507 TFKFGSRMHNXDEI 548
KFGS ++ +++
Sbjct: 143 DMKFGSWTYDGNQL 156
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 55.6 bits (128), Expect = 5e-10
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = +3
Query: 153 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 329
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 330 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 506
+LW+PDV++ N+A G + V +NGS ++ + + + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 142
Query: 507 TFKFGSRMHNXDEI 548
KFGS ++ +++
Sbjct: 143 DMKFGSWTYDGNQL 156
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 54.8 bits (126), Expect = 9e-10
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 153 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 329
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 330 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 506
+LW+PDV++ N+A G + V + GS ++ + M + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHC 142
Query: 507 TFKFGSRMHNXDEI 548
KFGS ++ +++
Sbjct: 143 DMKFGSWTYDGNQL 156
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 425
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 426 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEI 548
++ + M + +P D Q C KFGS ++ +++
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQL 156
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 425
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 426 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEI 548
++ + M + +P D Q C KFGS ++ +++
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQL 156
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 44.0 bits (99), Expect = 2e-06
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Frame = +3
Query: 108 SLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNWIDK 275
++S ++DS +YD+ P+ + V +T++ L +++ E + + + W D
Sbjct: 40 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 99
Query: 276 RLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSV 428
RL++ G T V SE +W PD +N ATT+ ++ RV ++GS+
Sbjct: 100 RLAYGKRP-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHHSGSI 155
Query: 429 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 524
+ RL I+ M L P D Q C + S
Sbjct: 156 TRSIRLTITASCPMNLQYLPMDRQLCHIEIES 187
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.34
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 393 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 494
A+ + N + SW + ++ + + M LDNW ND
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 572 SFCQSRKSNFVXIVHPRTELERASLHVVGPIV 477
S+C + FV RTEL + + HV IV
Sbjct: 310 SWCYKLQEQFVTNSEVRTELFKLAQHVSANIV 341
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 572 SFCQSRKSNFVXIVHPRTELERASLHVVGPIV 477
S+C + FV RTEL + + HV IV
Sbjct: 310 SWCYKLQEQFVTNSEVRTELFKLAQHVSANIV 341
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.4
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 440 LYPG-DGAVIRYTGAESVVPGGGC 372
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,115
Number of Sequences: 336
Number of extensions: 3425
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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