Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L19
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    25   1.00 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   7.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.3  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   9.3  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   9.3  

>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 18  LTPFVSCLVIYLNLDFITKTSQTVVSG 98
           L P V  +  Y + DF+TKT  T+  G
Sbjct: 57  LFPSVPFISRYASEDFVTKTGNTIPEG 83


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 216  ERQHSRGIRSSDSRRLVPPPEHS 284
            E +      S  S  +VPPP+HS
Sbjct: 1789 EEEREEAPPSVHSSTVVPPPQHS 1811


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 615 FCITTSWYMTSSEIVKALKS 556
           + I T W+ T  E+++ LKS
Sbjct: 303 YAIATMWHETPEEMMEFLKS 322


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 565 RFHDLGRCHIPGC 603
           R  ++  CHIPGC
Sbjct: 310 RKKNIHSCHIPGC 322


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 554 LDLSAFTISEDV 589
           LD+++FTI EDV
Sbjct: 585 LDVTSFTIQEDV 596


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory
          receptor candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 27 FVSCLVIYLNLDFIT 71
          F++ LV YLN+ FIT
Sbjct: 14 FINPLVKYLNIFFIT 28


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 261 LVPPPEHSRYTADQASN-STANTP 329
           LVP P+ +  TA  ASN S + +P
Sbjct: 199 LVPIPQRTASTASSASNYSPSQSP 222


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 478 KDIGHMRRVVSEERFTGNRRR 540
           K +GH RR V     TGN  R
Sbjct: 218 KVLGHRRRAVEISLTTGNYSR 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,655
Number of Sequences: 336
Number of extensions: 4358
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)