Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L19
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1781 + 29468919-29468951,29469057-29469184,29469349-294694... 53 3e-07
03_01_0107 + 849489-850652,850745-850835,850926-851083,851180-85... 37 0.018
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 35 0.071
02_02_0017 - 6131265-6131284,6131654-6131774,6132011-6132146,613... 35 0.094
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 31 0.87
07_03_0971 + 23038409-23039134,23040321-23040611 30 2.0
09_02_0292 + 6991202-6991937,6998629-6999185,6999489-7000196 30 2.7
07_01_1054 + 9250298-9250428,9250889-9251489 30 2.7
01_06_0405 + 29103723-29103839,29103928-29104012,29104572-291046... 29 3.5
12_02_1177 - 26708215-26708309,26708355-26708392,26708476-267095... 29 6.2
10_06_0029 + 9822216-9823124,9825210-9825329,9826188-9826304,982... 29 6.2
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388... 28 8.1
01_01_0776 - 6010225-6010728 28 8.1
>07_03_1781 +
29468919-29468951,29469057-29469184,29469349-29469433,
29469771-29469824,29470072-29470163,29470280-29470383,
29470811-29470886,29471231-29471678,29471874-29471916,
29471977-29472209,29472302-29472505,29472595-29472693,
29472789-29472861,29473373-29473500,29473614-29473836,
29473992-29474215,29474296-29474423,29475053-29475167,
29475603-29475658,29475795-29475888,29475966-29476152,
29476229-29476309,29476384-29476484,29476567-29476629,
29476800-29476907
Length = 1059
Score = 52.8 bits (121), Expect = 3e-07
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 6/185 (3%)
Frame = +2
Query: 194 VQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNYESIVTQ-IHFITG 370
+ +G P+ AS LA+DP K++G +E G + S+ + + FI
Sbjct: 29 LHYGIPYTASLLAFDPVQRLLALATLDGRIKIFGGDNIE--GLLISPNSLPYKFLQFIQN 86
Query: 371 TGRLISLCDDNSLHLWEINEKSLVELKSHVFEGK-NKKISAICVESSAKNALLGTEGGNI 547
G LI++ ++N + +W + E + + K + I+A V LG E G +
Sbjct: 87 QGFLIAISNENEIQVWNL------EFRQLFYSSKWDINITAFAVVEGTFLMYLGDENGLL 140
Query: 548 YSLDLSAFTISEDVIYQDVVMQNCPEDYKVN---PGAVESVYEHPKT-PTRILIGYNRGL 715
L + +V + + E V+ P ++ + P T TR+LI Y +GL
Sbjct: 141 SVLKYDVDDGKLQKMPYNVPIHSLAEAACVSLEDPQSIVGILPQPDTFGTRVLIAYEKGL 200
Query: 716 AVLWD 730
VLWD
Sbjct: 201 LVLWD 205
>03_01_0107 +
849489-850652,850745-850835,850926-851083,851180-851231,
852373-852452,852540-852633,852711-853231,854087-854202,
854242-854293
Length = 775
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +2
Query: 323 HTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVE 502
HTNY + V Q H T IS C D + +W++ +V+ + + I+A+C
Sbjct: 415 HTNYVTCV-QFH-PTSDNYFISGCIDGLVRIWDVRRCQVVD-----WADTKEIITAVCYR 467
Query: 503 SSAKNALLGTEGGNIYSLDLS 565
K A++GT GN D S
Sbjct: 468 PDGKAAVVGTITGNCRHYDAS 488
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 35.1 bits (77), Expect = 0.071
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 344 VTQIHFITGTGR--LISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKN 517
V + + TG R LI+ DD++ +W+ KS V+ EG ISA+C
Sbjct: 183 VNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQ----TLEGHTHNISAVCFHPELPI 238
Query: 518 ALLGTEGGNI 547
+ G+E G +
Sbjct: 239 IITGSEDGTV 248
>02_02_0017 -
6131265-6131284,6131654-6131774,6132011-6132146,
6132423-6132529,6133006-6133099,6133199-6133395,
6134401-6134472,6135128-6135304,6135393-6135467,
6135557-6135697,6136439-6136627,6136969-6137034,
6137118-6137268,6137596-6137664,6138751-6138899,
6138969-6139100,6139198-6139523,6139599-6139635,
6139765-6139803,6140196-6140250,6140363-6140424,
6140512-6140532,6140820-6140822
Length = 812
Score = 34.7 bits (76), Expect = 0.094
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 344 VTQIHFITGTGR--LISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKN 517
V + + TG R LI+ DD + +W+ KS V+ EG +SA+C
Sbjct: 201 VNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQ----TLEGHAHNVSAVCFHPELPI 256
Query: 518 ALLGTEGGNI 547
L G+E G +
Sbjct: 257 TLTGSEDGTV 266
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 31.5 bits (68), Expect = 0.87
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 380 LISLCDDNSLHLWEINEKS--LVELKSHVFEGKNKKISAICVESSAKNALLGTEG--GNI 547
L++ DD S+HLW+ ++ + LK H + IS +C+ S + + ++ T G +
Sbjct: 192 LVTAGDDGSVHLWDTTARTPKVSWLKQH-----SAPISGVCI-SPSSDKIIATVGLDKKL 245
Query: 548 YSLDLSAFTISEDVIYQDVVMQNCPEDYKVNPGAVESVYEHPK-TPTRILIGYNRGLAV 721
Y+LD + + + ++ D N G V K P IL YN AV
Sbjct: 246 YTLDSGSRRPTHTIPHEAPFSSLAYNDDGTNSGRVVFYDVRGKPQPLTILRAYNSSEAV 304
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/52 (21%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 305 VELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVE-LKSH 457
+++Y H N + + +T ++S +DN +++W++ K++++ L+ H
Sbjct: 253 LKMYSGHVNRKYCLQSAFSVTNGKYIVSGSEDNCVYIWDLQGKNILQKLEGH 304
>09_02_0292 + 6991202-6991937,6998629-6999185,6999489-7000196
Length = 666
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 674 KTPTRILIGYNRGLAVLWDRXAXAPTHTFVSNQQL 778
K PT +++G+N GLA D P H S +L
Sbjct: 245 KGPTEMILGWNSGLAKQGDEKGRTPLHFAASTNRL 279
>07_01_1054 + 9250298-9250428,9250889-9251489
Length = 243
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = -1
Query: 301 WSAVYLECSGGGTKRRESE 245
W+++YLE SGGG +RR S+
Sbjct: 186 WTSLYLEPSGGGDRRRGSD 204
>01_06_0405 +
29103723-29103839,29103928-29104012,29104572-29104674,
29104798-29104882,29105414-29105497,29105627-29105730,
29106522-29106783,29106978-29107414,29107637-29107718,
29109913-29110089,29110640-29110732,29110812-29110877,
29110992-29111038,29111165-29111430,29111443-29111845,
29111992-29112376
Length = 931
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 398 DNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESS 508
DNS H W NEK L E+ H +G K S E S
Sbjct: 513 DNSAHCWMFNEKHLEEIPLHT-DGPELKESVDLTEVS 548
>12_02_1177 -
26708215-26708309,26708355-26708392,26708476-26709563,
26709826-26709945,26710018-26710098,26710696-26710812,
26711122-26711904
Length = 773
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 119 IRGKGQQPSAERQKLQNELFAFRKTVQHGFPH 214
I G+G A+R N FA + + HGFPH
Sbjct: 225 ISGEGSAAGADRGGRINRPFAGMRFILHGFPH 256
>10_06_0029 +
9822216-9823124,9825210-9825329,9826188-9826304,
9826387-9826476,9826706-9826756
Length = 428
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 228 SRGIRSSDSRRLVPPPEHSRYTADQASNSTANTPITNR*SHRYISSQGQAV*Y 386
SR SS S +P +R A ++TA P+T R +S QG++ Y
Sbjct: 47 SRHASSSSSSSSLPSCSAARVAVTPAPHATATAPVTMRMRSLSVSFQGESFVY 99
>02_04_0624 +
24538095-24538183,24538429-24538612,24538725-24538886,
24538988-24539225,24539301-24539370,24539439-24539530,
24539799-24539836,24540018-24540039,24540462-24540618,
24540702-24540753,24542144-24542207,24542279-24542362,
24543418-24543543,24543622-24543818,24543903-24544091,
24544186-24544434,24544507-24544556,24544977-24545059,
24545164-24545449,24545751-24545794,24545878-24546626
Length = 1074
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 521 LLGT-EGGNIYSLDLSAFTISEDVIYQDV--VMQNCPEDYKVNPGAVESVYEHPKTPTR 688
+LGT E N+ SL+ +FT+ + Y+DV V+ + P + + ++++H + +R
Sbjct: 799 ILGTREYNNLASLEAPSFTLLHEEDYEDVPDVLASEPVEAECKSATNNTIFDHIRKKSR 857
>01_01_0776 - 6010225-6010728
Length = 167
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 695 IGYNRGLAVLWDRXAXAPTHTF 760
+GYNR +W R A THTF
Sbjct: 48 VGYNRATGFVWLRQKKAITHTF 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,599,212
Number of Sequences: 37544
Number of extensions: 486439
Number of successful extensions: 1468
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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