Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L19
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 95 4e-20
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 95 4e-20
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 95 4e-20
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 95 4e-20
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 87 1e-17
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 87 1e-17
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 87 1e-17
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr... 33 0.34
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 31 1.0
AL033514-36|CAH19095.1| 222|Caenorhabditis elegans Hypothetical... 30 2.4
U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF098995-3|AAC67483.1| 276|Caenorhabditis elegans F-box b prote... 29 3.1
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z82271-5|CAI46599.1| 378|Caenorhabditis elegans Hypothetical pr... 29 5.5
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 29 5.5
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 28 7.3
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.6
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 9.6
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 28 9.6
AL032653-3|CAA21713.1| 861|Caenorhabditis elegans Hypothetical ... 28 9.6
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 28 9.6
AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical ... 28 9.6
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 95.5 bits (227), Expect = 4e-20
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Frame = +2
Query: 155 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 334
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 335 ESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAK 514
E ++ + F+ G LI+ C +S+HLW +K+ E+ H + + +S I + + K
Sbjct: 88 EPVL-HMQFLVNEGGLITSCGTDSIHLWNYRQKT-AEI-VHTVQLSKESVSCIHLPVAGK 144
Query: 515 NALLGTEGGNIYSLDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRI 691
+GT+ GN+Y L L++F +S VI + + +C +V+PG V + P T++
Sbjct: 145 WLFIGTDKGNVYFLCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKL 200
Query: 692 LIGYNRGLAVLWD 730
LI Y++G+ V W+
Sbjct: 201 LIVYDKGIVVQWN 213
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 95.5 bits (227), Expect = 4e-20
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Frame = +2
Query: 155 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 334
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 335 ESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAK 514
E ++ + F+ G LI+ C +S+HLW +K+ E+ H + + +S I + + K
Sbjct: 88 EPVL-HMQFLVNEGGLITSCGTDSIHLWNYRQKT-AEI-VHTVQLSKESVSCIHLPVAGK 144
Query: 515 NALLGTEGGNIYSLDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRI 691
+GT+ GN+Y L L++F +S VI + + +C +V+PG V + P T++
Sbjct: 145 WLFIGTDKGNVYFLCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKL 200
Query: 692 LIGYNRGLAVLWD 730
LI Y++G+ V W+
Sbjct: 201 LIVYDKGIVVQWN 213
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 95.5 bits (227), Expect = 4e-20
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Frame = +2
Query: 155 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 334
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 335 ESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAK 514
E ++ + F+ G LI+ C +S+HLW +K+ E+ H + + +S I + + K
Sbjct: 88 EPVL-HMQFLVNEGGLITSCGTDSIHLWNYRQKT-AEI-VHTVQLSKESVSCIHLPVAGK 144
Query: 515 NALLGTEGGNIYSLDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRI 691
+GT+ GN+Y L L++F +S VI + + +C +V+PG V + P T++
Sbjct: 145 WLFIGTDKGNVYFLCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKL 200
Query: 692 LIGYNRGLAVLWD 730
LI Y++G+ V W+
Sbjct: 201 LIVYDKGIVVQWN 213
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 95.5 bits (227), Expect = 4e-20
Identities = 55/193 (28%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Frame = +2
Query: 155 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 334
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 335 ESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAK 514
E ++ + F+ G LI+ C +S+HLW +K+ E+ H + + +S I + + K
Sbjct: 88 EPVL-HMQFLVNEGGLITSCGTDSIHLWNYRQKT-AEI-VHTVQLSKESVSCIHLPVAGK 144
Query: 515 NALLGTEGGNIYSLDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRI 691
+GT+ GN+Y L L++F +S VI + + +C +V+PG V + P T++
Sbjct: 145 WLFIGTDKGNVYFLCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKL 200
Query: 692 LIGYNRGLAVLWD 730
LI Y++G+ V W+
Sbjct: 201 LIVYDKGIVVQWN 213
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 87.0 bits (206), Expect = 1e-17
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 194 VQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNYESIVTQIHFITGT 373
V+HG P A+DP ++ G GV+ +H + E ++ + F+
Sbjct: 6 VRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESGEPVL-HMQFLVNE 64
Query: 374 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 553
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 554 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 730
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 123 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 178
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 87.0 bits (206), Expect = 1e-17
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 194 VQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNYESIVTQIHFITGT 373
V+HG P A+DP ++ G GV+ +H + E ++ + F+
Sbjct: 6 VRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESGEPVL-HMQFLVNE 64
Query: 374 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 553
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 554 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 730
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 123 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 178
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 87.0 bits (206), Expect = 1e-17
Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Frame = +2
Query: 194 VQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNYESIVTQIHFITGT 373
V+HG P A+DP ++ G GV+ +H + E ++ + F+
Sbjct: 6 VRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESGEPVL-HMQFLVNE 64
Query: 374 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 553
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 554 LDLSAFTISEDVI-YQDVVMQNCPEDYKVNPGAVESVYEHPKTPTRILIGYNRGLAVLWD 730
L L++F +S VI + + +C +V+PG V + P T++LI Y++G+ V W+
Sbjct: 123 LCLNSFLLSPYVINWNKAIDLSC----RVHPGPVRQLAVSPAENTKLLIVYDKGIVVQWN 178
>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical
protein ZC53.4 protein.
Length = 1410
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 311 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNK 478
L Q+ YE+++TQ + T L+ D+N + E+NE S E++ +FE NK
Sbjct: 693 LASQNDEYETLLTQEAYTMYT--LLKHSDENVKSIDELNEMSRDEVRKELFEMNNK 746
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 332 YESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVE 445
+E V + F+TG GR++S DD S+ +W+I + +E
Sbjct: 276 HEKGVNCVEFLTG-GRIVSGSDDCSICVWDIQTQKCIE 312
>AL033514-36|CAH19095.1| 222|Caenorhabditis elegans Hypothetical
protein Y75B8A.39 protein.
Length = 222
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +2
Query: 470 KNKKISAICVESSAKNALLGTEGGNIYSLDLSAFTISEDVIYQDVVMQNCPED------- 628
KNK SA+C++ +N E + L+++ + + + +C ED
Sbjct: 24 KNKLHSAVCLKKKKQNLTDNQELCDKLQLEINILQSQIHEKEKTLCLGSCQEDLFNFLQY 83
Query: 629 YKVNPGAVESVYEHPKTPTRILIGYNRGLA 718
Y N A+E + EH K+ + LI + LA
Sbjct: 84 YNNNKQAIEKMVEHGKSQDQNLIKRQKALA 113
>U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical
protein T19B4.5 protein.
Length = 400
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Frame = +3
Query: 141 PLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPE---HSRYTADQASN 311
P LRG ++ + RQS+ A + +Q S+ IR R + P P+ H+ + N
Sbjct: 48 PQLRGNPMHHHH-YDNRQSAPAYQVPQQQSQSIRRGVGRPMAPRPQSYPHNMDMVQKLQN 106
Query: 312 STANTPITNR*SHRYISSQGQAV 380
P R R IS G +
Sbjct: 107 KNVYMPAQQRPQTR-ISPAGARI 128
>AF098995-3|AAC67483.1| 276|Caenorhabditis elegans F-box b protein
protein 17 protein.
Length = 276
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +2
Query: 380 LISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTE 535
L + C + +H +++++L H G N + +ICV S + G E
Sbjct: 204 LTTNCTNLEIHYQSLSDRNLNLFMKHWIRGSNPNLQSICVNFSREMRSFGAE 255
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 MNYLHSERQSSM-ASRTERQHSRGIRSSDSRRLVPPPEHSRYTADQ 302
MN+ H + M A T++QH ++VPPP H Q
Sbjct: 448 MNHPHQQNHPHMNAQMTQQQHPGQYLPQQYMQMVPPPHHQMQQMQQ 493
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 168 MNYLHSERQSSM-ASRTERQHSRGIRSSDSRRLVPPPEHSRYTADQ 302
MN+ H + M A T++QH ++VPPP H Q
Sbjct: 445 MNHPHQQNHPHMNAQMTQQQHPGQYLPQQYMQMVPPPHHQMQQMQQ 490
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 368 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 538
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1515 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1568
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 368 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 538
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1540 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1593
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 368 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 538
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1515 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1568
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 368 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 538
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1540 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1593
>Z82271-5|CAI46599.1| 378|Caenorhabditis elegans Hypothetical
protein T01G1.1b protein.
Length = 378
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 368 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 538
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 313 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 366
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 368 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 538
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1544 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1597
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/97 (22%), Positives = 40/97 (41%)
Frame = +2
Query: 284 KVYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 463
+++G+P + ++ V + F L+S DD + +W NE EL S
Sbjct: 190 ELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDS--C 247
Query: 464 EGKNKKISAICVESSAKNALLGTEGGNIYSLDLSAFT 574
G +S++ +A L +E +I D+ T
Sbjct: 248 RGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRT 284
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 476 KKISAICVESSAKNALLGTEGGNIY 550
K++ CV S++K+ LGT G++Y
Sbjct: 44 KRVKYTCVASTSKSLCLGTSTGSVY 68
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 189 RQSSMASRTERQHSRGIRSSDSRRLVPPPEHSRYTADQASNSTANTP 329
RQS R+ R+ SS SR PPP R ++Q + +P
Sbjct: 491 RQSPQRRRSPRRRRSPSSSSRSRSPPPPPRRPRQDSEQQAPVAVKSP 537
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +3
Query: 132 ASSPLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPEHSRYTADQASN 311
AS RGR+ + S AS R SRG R +++ RL + T+ + S
Sbjct: 61 ASKSATRGRTASKTPKTPSKTPSSASARSRSRSRG-RPTNASRLSASTPSASSTSVKRSR 119
Query: 312 STANTP 329
S TP
Sbjct: 120 SVTKTP 125
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 311 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKS----LVELKSHVFEGKNK 478
++ H + ES VTQ+ F+ G +IS D+ + W I +S +++ ++ ++
Sbjct: 138 MFRLHGHKES-VTQMKFVRGDRFIISTSKDSLIKFWSIASQSCFYTVMDSRNEIYSMSLH 196
Query: 479 KISAICVESSAKNALL 526
+ + V ++A+ LL
Sbjct: 197 RDETVLVAATAELELL 212
>AL032653-3|CAA21713.1| 861|Caenorhabditis elegans Hypothetical
protein Y54E5B.2 protein.
Length = 861
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 362 ITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVE 502
+T + R+ ++ DD ++ +W I+++ L + VF G + AICV+
Sbjct: 147 VTDSTRIFTISDDRTIRMWPIDDRESGPLCT-VF-GHTARPFAICVD 191
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 308 ELYGQHTNYESI-VTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKI 484
EL G+ T S + ++F+ G ++S DNSL LW + + + EG +K
Sbjct: 264 ELIGKITGIHSDEINCLYFVPGEPIMLSASLDNSLRLWIFDSADGMPRELVRLEGHSKPC 323
Query: 485 SAI 493
++I
Sbjct: 324 ASI 326
>AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical
protein F56A4.9 protein.
Length = 462
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 347 TQIHFITGTGRLISLCDDNS-LHLWEINEKSLVELKSHVFEG 469
+ I+F+ T RL++L + L W+I + +L E+K ++F+G
Sbjct: 155 SNIYFLRNTVRLLNLPNLKVILKNWKIAQCTLCEMKKNIFKG 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,953,736
Number of Sequences: 27780
Number of extensions: 410696
Number of successful extensions: 1328
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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