Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L18
(943 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 1e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 42 0.001
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 41 0.002
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 40 0.003
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 39 0.007
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.027
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 36 0.036
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 36 0.036
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 35 0.083
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.11
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 33 0.33
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 31 1.8
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.8
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 30 2.4
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 30 2.4
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.4
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 29 4.1
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 4.1
SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 29 4.1
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 29 5.5
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 29 7.2
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Frame = +2
Query: 155 LLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 319
LL Y +D+ P + + + L + LR ++ E + + I ++ W D L WN
Sbjct: 39 LLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLKWNPD 98
Query: 320 EWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN 442
++G + ++ +R+W+PDV+L N A+T +L ++ N
Sbjct: 99 DFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTN 140
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Frame = +2
Query: 143 MIGSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 307
++ L Y +D+ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 308 WNAGEW-GCSTWLVSSERLWRPDVVLLN 388
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +2
Query: 155 LLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 319
L TY++D P D + V L L L ++ + T+ + ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 320 EW-GCSTWLVSSERLWRPDVVLLNAA 394
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 281 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 394
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 254 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAA 394
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN A
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNA 80
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +2
Query: 242 ESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD-- 412
E +++ ++ W + LSWNA E+G S + ++LW+PD+ L N A ++A
Sbjct: 104 EKYELLKLSLYVRQIWKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSL 163
Query: 413 YALRA--RVSNNGLRL 454
Y +A +VS+ GL +
Sbjct: 164 YGFKAKIKVSHTGLNM 179
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 254 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 388
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 209 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 385
LTL+ H ++E ++ L+ W D RL+WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 386 NAA 394
N+A
Sbjct: 81 NSA 83
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 38.7 bits (86), Expect = 0.007
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 391
+ + W + LSWNA E+ G S VS +R W PD++L N+
Sbjct: 21 IAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNS 60
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 36.7 bits (81), Expect = 0.027
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++MNW + L WNA E+G L +S +W PD+VL N
Sbjct: 84 VRMNWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 36.3 bits (80), Expect = 0.036
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 218 HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L N A
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 395 ATT 403
T
Sbjct: 166 DET 168
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 36.3 bits (80), Expect = 0.036
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 394
+ + W D RL WN ++G +++ S +LW PD+ L N A
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNA 316
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 35.1 bits (77), Expect = 0.083
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAAT 400
+++ W D L+WN ++G + V +W+PD++L N A+T
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPAST 68
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 34.7 bits (76), Expect = 0.11
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 236 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
+ E L+M W D L WN ++G T + + + +W P V++ N A
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQA 587
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 33.1 bits (72), Expect = 0.33
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 370
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 371 DVVLLN 388
D+VL N
Sbjct: 127 DIVLYN 132
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 33.1 bits (72), Expect = 0.33
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 HANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 388
H + + TV L W D L+WN ++ G + V +W PD+VL N
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYN 253
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 32.3 bits (70), Expect = 0.59
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 257 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
V + + + W + L+W+ +G T + V R+WRPD++L N A
Sbjct: 69 VSLHQIIDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNA 115
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 439
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 440 NG 445
NG
Sbjct: 124 NG 125
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 335 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGL 448
TWL+ +WRPD+VL +A D L R ++++NGL
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNGL 307
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 287 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 382
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
+ + W + ++WN E+G + + LW+PD+ L N A
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNA 84
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 278 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
+ W D L W+ + G T + V LW+PD+VL N
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYN 125
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.4
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 287 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 388
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSNNG 445
W + L WN +G + VS ++W PD+VL NA A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDG 97
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 287 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 388
W D L W+ ++ S + +W PDV L+N
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLIN 437
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 224 RHANIRESEST-VRIQADLQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 388
R+++ ++S++ + + W D L WN G V +W PD+ L+N
Sbjct: 10 RYSSCQDSKAQELTTNLRIYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 259 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 176
HG LG S+S + G+++ D+GVGGGV
Sbjct: 91 HGHLG----SVSMIMGKMNNDYGVGGGV 114
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 259 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 176
HG LG S+S + G+++ D+GVGGGV
Sbjct: 358 HGHLG----SVSMIMGKMNNDYGVGGGV 381
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 394
+ + W ++ L+W+ + G T + ++ +W PD+VL ++A
Sbjct: 45 VNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSA 85
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 28.7 bits (61), Expect = 7.2
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +1
Query: 118 RKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQ 297
R+ N H R A + SG P R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 298 TTELE 312
+ + E
Sbjct: 484 SRDSE 488
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 260 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
+++ + + W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1463 KLKQIVDLQWENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,591,164
Number of Sequences: 59808
Number of extensions: 360239
Number of successful extensions: 1036
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2752873431
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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