Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L18
(943 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 47 7e-07
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 45 4e-06
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 44 5e-06
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 41 6e-05
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 40 8e-05
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 38 6e-04
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 25 4.4
AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein. 24 7.7
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 47.2 bits (107), Expect = 7e-07
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Frame = +2
Query: 143 MIGSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 307
++ +LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 308 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNG 445
WN E+G L ++ +LW+PDV++ N+A G Y V NNG
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNG 134
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 44.8 bits (101), Expect = 4e-06
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +2
Query: 155 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 325
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 326 G-CSTWLVSSERLWRPDVVLLNAA 394
G + +WRPDVVL N A
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNA 129
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 44.4 bits (100), Expect = 5e-06
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +2
Query: 143 MIGSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 307
++ +LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 308 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNG 445
WN E+G L ++ +LW+PDV++ N+A G Y V NNG
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNG 134
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 43.2 bits (97), Expect = 1e-05
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNG 445
L++ W D + WN+ E+G L + RLW+PDV++ N+A G Y V NNG
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNG 117
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 43.2 bits (97), Expect = 1e-05
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNG 445
L++ W D L WN E+G L + R+W+PDV++ N+A G Y V NNG
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNG 149
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 41.9 bits (94), Expect = 3e-05
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 367
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 54 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWR 111
Query: 368 PDVVLLNAAATTAGDYAL----RARVSNNGL 448
PD+VL N A G Y + +A V NNG+
Sbjct: 112 PDIVLYNNA---DGHYEVTLMTKATVYNNGM 139
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 41.9 bits (94), Expect = 3e-05
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +2
Query: 155 LLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWN 313
LL+ Y+R P S ++V L L L N+++ T I L+ W D + W+
Sbjct: 43 LLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHKFKWD 100
Query: 314 AGEWGCSTWL-VSSERLWRPDVVLLNAA 394
E+G T L V SE +W PD+VL N A
Sbjct: 101 PAEYGGVTELYVPSEHIWLPDIVLYNNA 128
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 40.7 bits (91), Expect = 6e-05
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +2
Query: 155 LLATYDRDSPP----DSKIVVNLTLHLRH---ANIRESESTVRIQADLQMNWIDKRLSWN 313
LL+ Y+R P ++ V + L L N++ T + ++ W D +L WN
Sbjct: 31 LLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWN 88
Query: 314 AGEWG-CSTWLVSSERLWRPDVVLLNAA 394
++G T V SE +W PD+VL N A
Sbjct: 89 PDDYGGVDTLHVPSEHIWLPDIVLYNNA 116
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 40.3 bits (90), Expect = 8e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 194 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 367
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 54 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWR 111
Query: 368 PDVVLL-NAAATTAGDYALRARVSNNGL 448
PD+VL NA A +A + + GL
Sbjct: 112 PDIVLYNNADGNFEVTLATKATIYSEGL 139
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 39.5 bits (88), Expect = 1e-04
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 233 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG 409
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 410 DYALR 424
+Y +R
Sbjct: 122 NYEVR 126
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 39.5 bits (88), Expect = 1e-04
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 394
++ W D +L W E+G L V S+ +WRPD+VL N A
Sbjct: 76 VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 116
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 37.5 bits (83), Expect = 6e-04
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 275 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 388
++ W D +L W+ E+G L V SE++W PD+VL N
Sbjct: 82 VKQKWFDYKLRWDPEEYGGVEMLYVPSEQIWLPDIVLYN 120
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 24.6 bits (51), Expect = 4.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 253 HRANTGRSSNELDRQTTELERRGVGLQHLAGVLG 354
+R+N R++ + DR+ + GVG AGV G
Sbjct: 586 NRSNHHRTTEQADREASVCAAGGVGAAAAAGVGG 619
>AY578795-1|AAT07300.1| 441|Anopheles gambiae Gbb-60A2 protein.
Length = 441
Score = 23.8 bits (49), Expect = 7.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 350 RTPAKCCSPTPLRSNSVV 297
R P CC+PT L SV+
Sbjct: 400 RVPKPCCAPTKLNPISVL 417
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,803
Number of Sequences: 2352
Number of extensions: 12093
Number of successful extensions: 45
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -