Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L17
         (899 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    25   0.81 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   4.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   4.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.9  

>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 368 YPSMSAISATVNTDFLTTG 312
           YPS+  IS T+  D +TTG
Sbjct: 59  YPSVHFISRTLGQDLITTG 77


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 250 PPYPHRVRPRPI*KTSPELHVF*SQIS*TVESRIRGQSVRN 128
           PP+PH   PR    T+P  H   + +S    +++ GQ VRN
Sbjct: 738 PPHPHHQPPRNPVGTNP--HDINNPLS---VNQLTGQCVRN 773


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 250 PPYPHRVRPRPI*KTSPELHVF*SQIS*TVESRIRGQSVRN 128
           PP+PH   PR    T+P  H   + +S    +++ GQ VRN
Sbjct: 630 PPHPHHQPPRNPVGTNP--HDINNPLS---VNQLTGQCVRN 665


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 101 PWRSRYCE 124
           PWRS YC+
Sbjct: 78  PWRSNYCD 85


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +2

Query: 5   GIYSQIRYQTRKRWQLSSTPRQIVWSL 85
           G++ +I +  RKR+++      +VW +
Sbjct: 230 GVWKRIPHDYRKRFRMEKIYVALVWGV 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,431
Number of Sequences: 336
Number of extensions: 3527
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)