Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L17
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 35 0.10
11_06_0610 - 25449085-25453284 33 0.23
03_05_0267 - 22538631-22539452 33 0.41
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 32 0.54
09_06_0230 + 21717225-21717301,21717888-21717972,21718045-217181... 31 1.6
12_01_0702 - 6006553-6007350,6010743-6011270 30 2.2
01_01_0715 - 5542648-5543219,5543352-5543544 30 2.2
03_05_0171 + 21486473-21486775,21486835-21486912,21487223-214874... 30 2.9
07_01_0559 + 4151054-4151178,4151306-4153018,4153121-4153412,415... 29 3.8
10_07_0144 - 13367579-13368805,13369540-13369578,13369662-133698... 29 5.0
02_02_0338 + 9105725-9106581,9106950-9107091 29 5.0
11_06_0416 + 23307984-23308281,23310083-23310900 29 6.7
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 29 6.7
07_03_1433 + 26513728-26514135,26525534-26526280 29 6.7
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 29 6.7
07_01_0543 + 4008439-4008808,4009209-4009274,4009409-4009584 28 8.8
05_02_0082 - 6447848-6448103,6448464-6448591 28 8.8
02_05_0774 + 31667839-31668540 28 8.8
02_04_0435 + 22912993-22913456,22913847-22914012,22914096-229141... 28 8.8
02_01_0104 - 767490-767627,768025-768158,768971-769229,769315-76... 28 8.8
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 34.7 bits (76), Expect = 0.10
Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
Frame = +2
Query: 554 SSPRAPCTARGSPPTRDSPPATG*TSPRPAGXD--------YVHDH-ELXPCRHHGSGEX 706
S R+P RGSPP R SPPA SP P H E P R +GS
Sbjct: 224 SRSRSPARDRGSPPRRRSPPARRERSPAPRSRSPRRRSPVKTTSSHRERSPVRRNGSPRR 283
Query: 707 LPVR 718
PVR
Sbjct: 284 SPVR 287
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 539 TAWWPSSP---RAPCTARGSPPTRDSPPATG*TSPRPAG 646
+ W P SP +AP + PPT SPPAT +SP P G
Sbjct: 516 SGWLPKSPERKKAP-PPQAEPPTEYSPPATPESSPPPEG 553
>03_05_0267 - 22538631-22539452
Length = 273
Score = 32.7 bits (71), Expect = 0.41
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 545 WWPSSPRAPCTARGSPPTRDSPPAT 619
WWP SP +P + P R SPP++
Sbjct: 180 WWPCSPSSPPASPSPSPARTSPPSS 204
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 32.3 bits (70), Expect = 0.54
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +2
Query: 554 SSPRAPCTARGSPP-TRDSPPATG*TSPR---PAGXDYVHDHELXPCRHHGSGEXLPVR 718
S R+P RGSPP R+ PA SPR P H E P R +GS PVR
Sbjct: 17 SRSRSPARDRGSPPRRRERSPAARSRSPRRRSPVKSTSSH-RERSPVRRNGSPRRSPVR 74
>09_06_0230 + 21717225-21717301,21717888-21717972,21718045-21718165,
21718244-21718368,21718940-21718984,21719082-21719345,
21720067-21720111,21720182-21720212,21721644-21721693,
21722433-21724310,21724406-21724564,21724821-21724939,
21726917-21727059,21727670-21727735,21728184-21728317,
21728454-21728591,21728927-21729186,21729295-21729406,
21730727-21730909
Length = 1344
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +1
Query: 298 EGE-GGPVVRKSVLTVAEMA-DMLGYSVGA-DDHPVMSLEKILKDRNAEEDA--TAVKFL 462
EGE G PV + +++E A L + V A +D P+M+L+++LK + A T + FL
Sbjct: 868 EGEPGAPVGSWAACSISEAAYGALDHPVNALEDSPLMNLQEVLKCHKGTKSAVHTGLLFL 927
Query: 463 VGHLQK 480
+L+K
Sbjct: 928 SKYLKK 933
>12_01_0702 - 6006553-6007350,6010743-6011270
Length = 441
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Frame = +3
Query: 258 EPILRSHQDIERRRRRGW----PCGQKVRVDCSRNGGHAGVLCGS*RSSGYELGE 410
EP R + ERRRRRGW G V+ SR GG G G G GE
Sbjct: 12 EPGRRKGRPKERRRRRGWRGRHGDGVPVKPRSSRGGGRCGDAEGGDGDVGRRSGE 66
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 539 TAWWPSSPRAPCTARGSPPTRDSPPATG-*TSPRPAG 646
TA PS P GSPP PPA G T+P PAG
Sbjct: 171 TARAPSPPVPAPAPAGSPPPPPPPPAGGNFTAPSPAG 207
>03_05_0171 +
21486473-21486775,21486835-21486912,21487223-21487407,
21487507-21487897
Length = 318
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +2
Query: 548 WPSSPRAPCTARGSPPTRD---SPPATG*TSPRPAGXDYVHDHE 670
WP++PR C + G+ P R+ + A SPR H+HE
Sbjct: 41 WPAAPRLVCRSSGARPPRERAVAAAAAAANSPRQQQQLGEHEHE 84
>07_01_0559 +
4151054-4151178,4151306-4153018,4153121-4153412,
4154327-4154636,4155041-4155261
Length = 886
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 55 LDASADCLESSTKT--CSVAQSILRAYFVLTDHEYGFQQFRKFVTKKREALGTFFK 216
LDA+ADC S+ K Q + R +F+ + + +++ K + K + + K
Sbjct: 725 LDAAADCYTSALKIRHTRAHQGLARVHFLRNNRDAAYEEMTKLIEKAKNNASAYEK 780
>10_07_0144 -
13367579-13368805,13369540-13369578,13369662-13369826,
13370083-13370193
Length = 513
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 548 WPSSPRAPCTARGSPPTRDSPPATG*T---SPRPAGXDYVHDHELXPCRHHGSGE 703
WP++ ++ + SPPT +P + T PR G DHE HHG+G+
Sbjct: 378 WPATVQSQAISSSSPPTSATPSVSSFTLGKHPREGG-----DHEARD--HHGNGK 425
>02_02_0338 + 9105725-9106581,9106950-9107091
Length = 332
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 566 APCTARGSPPTRDSPPATG*TSPRPAGXDYVHDH 667
AP TAR +PP + PP T RP H +
Sbjct: 25 APATARTTPPLKKPPPLAPPTQARPLKPPPAHQY 58
>11_06_0416 + 23307984-23308281,23310083-23310900
Length = 371
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 343 AEMADMLGYSVGADDHPVMSLEKILKDRNAEEDATAVKFLVG 468
A+ + GY VG D + ++KD E+DAT VK LVG
Sbjct: 140 AKALEESGYLVG-DSFSLRCDVAVVKDIRTEDDATTVKKLVG 180
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 599 RDSPPATG*TSPRPAGXDYVHDHELXPCRHHGSGEXLP 712
RD PP G SP P G V + P HH G P
Sbjct: 237 RDVPPGQGFNSPPPPGQGPVPPRDAPP-MHHAQGNVPP 273
>07_03_1433 + 26513728-26514135,26525534-26526280
Length = 384
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 554 SSPRAPCTARGSPPTRDSPPATG*TSPRPA 643
S+P +P SPPT PP+T T P PA
Sbjct: 53 STPPSPAPVSPSPPTTYPPPST--TPPNPA 80
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 554 SSPRAPCTARGSPPTRDSPPATG*TSPRPA 643
SS AP T G+P +P A G T PRPA
Sbjct: 41 SSASAPSTP-GTPTVAPAPAAAGATGPRPA 69
>07_01_0543 + 4008439-4008808,4009209-4009274,4009409-4009584
Length = 203
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 551 PSSPRAPCTARGSPPTRDSPPATG*TSPRP 640
P SP GSP +PPAT T RP
Sbjct: 146 PPSPPESTAGAGSPTATATPPATSQTQTRP 175
>05_02_0082 - 6447848-6448103,6448464-6448591
Length = 127
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +3
Query: 294 RRRRGWPCGQKVRVDCSRNGGHAGVLCGS*RSSGYELGEDFEGSQRRG 437
+R GWP G R R GG AG G + E E E S +G
Sbjct: 72 QRSAGWPAGDGGRGGPPRGGGSAGGEGGGVEETAEESVEGRESSAAKG 119
>02_05_0774 + 31667839-31668540
Length = 233
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/85 (28%), Positives = 37/85 (43%)
Frame = -1
Query: 455 LTAVASSSALRSFKIFSKLITG*SSAPTEYPSMSAISATVNTDFLTTGPPSPSSPFNILM 276
LTA+ S A S K + + S+A E P SA +T D ++ G P P +P + +
Sbjct: 141 LTAICQSLATSSSKN-TPAESAASAAEPESPKCSA--STEGEDSVSAGSPPPPTPLSPPV 197
Query: 275 RSKYRLKHSALSSPGPSTAHLKNVP 201
+L + T HL+ P
Sbjct: 198 PEMEKLDFTEAPWDESETFHLRKYP 222
>02_04_0435 +
22912993-22913456,22913847-22914012,22914096-22914146,
22914353-22914578,22915275-22915963,22916055-22916408
Length = 649
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 142 QSVRNTLAVSTAPRSKFLC*TPDNLPRRRGKL 47
Q ++ TLA +T P SK PD+ P+R+ K+
Sbjct: 506 QELKRTLAETTPPSSKVSSRLPDSGPQRKEKI 537
>02_01_0104 -
767490-767627,768025-768158,768971-769229,769315-769403,
769624-769774,769860-770003,770611-770730,771490-771658,
771789-772087
Length = 500
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = -3
Query: 645 PAGRGDVQPVAGGESL-----VGGLPRAVHGARGELGHQA 541
P G GDV VA GE L + GLP+ V G+LGH A
Sbjct: 53 PTGAGDVPSVAPGELLERRVTLPGLPQGV----GDLGHHA 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,318,890
Number of Sequences: 37544
Number of extensions: 469014
Number of successful extensions: 1823
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1819
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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