Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_L16
(863 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 61 1e-09
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 61 1e-09
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 59 4e-09
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 56 4e-08
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-08
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 1e-06
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 50 3e-06
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 7e-06
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 7e-06
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 48 1e-05
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 46 3e-05
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 5e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 41 0.001
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.005
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.011
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.014
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 36 0.056
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 35 0.074
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 34 0.13
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.14
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 32 0.69
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.69
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.69
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 32 0.69
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.2
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.1
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 30 2.8
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 30 2.8
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 30 2.8
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 30 2.8
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.9
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 29 4.9
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 4.9
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 6.5
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 8.5
SB_35258| Best HMM Match : LEA_4 (HMM E-Value=1.8) 28 8.5
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 61.3 bits (142), Expect = 1e-09
Identities = 38/156 (24%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Frame = +2
Query: 131 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 295
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 296 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 454
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 455 LDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
I + + + +P D+Q+C GS H+ ++D
Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFGSWTHDGLKID 190
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 131 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 295
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 296 WNAGEW-GCSTWLVSSERLWRPDVVLLN 376
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Frame = +2
Query: 275 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 439
W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 440 SWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
W+ ++T + + +P D Q+CT K GS +++ +D
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 219
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 59.3 bits (137), Expect = 4e-09
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Frame = +2
Query: 197 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 373
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 374 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHN 547
N+A + +R +++ G V W+ L + T M + +P D Q C + GS +
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGSWSTS 140
Query: 548 SDEMD--XXD*XXNIXYXPSSRAW 613
MD + N+ Y + W
Sbjct: 141 LRYMDVHPFEDTANLQYFVENGEW 164
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 56.0 bits (129), Expect = 4e-08
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = +2
Query: 263 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 421
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 422 SNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
S++GS +W+ I T + + +P D+Q C K GS H+ ++D
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKID 132
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 55.6 bits (128), Expect = 5e-08
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Frame = +2
Query: 242 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 412
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 413 ---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDE--MDXXD*X 577
V +NG V W+ + + + M + +P D Q C K S + E +D D
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFASWTGSQSELRLDAMDND 151
Query: 578 XNIXYXPSSRAWDVTDLVPVR 640
Y SS WD+ +R
Sbjct: 152 VRQNYSESSE-WDLLQTYTLR 171
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 53.2 bits (122), Expect = 3e-07
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = +2
Query: 215 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 388
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 389 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDE 556
++G+ + + + ++G+V W+ + + + + + +P D Q C + GS ++ E
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGSWAYDGFE 317
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Frame = +2
Query: 206 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 379
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 380 AATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGS 535
T AG Y S++G+ W ++ ++ + +P D Q C+ K GS
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Frame = +2
Query: 248 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 400
+++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A +
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 401 ----YALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
Y + + +NG SW+ + + +P D Q CT + GS ++ ++D
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLD 133
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 49.2 bits (112), Expect = 4e-06
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 263 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 427
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 428 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMDXXD--*XXNIXYXPS 601
NG W +I + ++ + +P D Q C K GS ++ +++ ++
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGSWSYSGRQLNLTSKGDSADLSKYTK 183
Query: 602 SRAWDVTDLVPVR 640
S WD+ + VR
Sbjct: 184 SGEWDLLGMRAVR 196
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/105 (22%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +2
Query: 263 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 427
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 428 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
+G+ +W+ +T + + +P D Q C K GS ++++ +D
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGSWTYDANSVD 148
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = +2
Query: 245 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YAL 409
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 410 RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
+S +GS +W + + + +P D QTC K GS + ++D
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGSWTYTIADVD 149
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 47.6 bits (108), Expect = 1e-05
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Frame = +2
Query: 275 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 439
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 440 SWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
W+ + S+ ++++ +P D Q C+ K GS + +D
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGSWTFDGFHLD 140
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Frame = +2
Query: 275 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 436
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 437 VSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEM 559
V WI + ++ ++++ WP D Q CT S + E+
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSSWTYTESEI 504
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Frame = +2
Query: 266 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 424
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 425 NNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEM 559
N G W + + SM L WP D QTC K GS + S+ M
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGSLSYGSNLM 227
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +2
Query: 263 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 427
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 428 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
+G+V W+ I + + + +P D Q C GS ++ ++D
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGSWHYDVSKLD 651
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +2
Query: 266 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 430
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 431 GSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
G + W + T + + +P D QTC GS +N ++D
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 191
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 143 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 307
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 308 EW-GCSTWLVSSERLWRPDVVLLNAA 382
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 263 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSN 427
+ + W + L+W+ +G T + V R+WRPD++L NA T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 428 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGS 535
+GS W+ + + + +P D Q+C K GS
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGS 170
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 269 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 382
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Frame = +2
Query: 275 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 433
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 434 SVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEM 559
V W+ ++ +++ WP D Q CT S ++ E+
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSSWTYDDQEI 103
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 40.7 bits (91), Expect = 0.001
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Frame = +2
Query: 161 RESPPDS---KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 328
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 329 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 481
+ +++W+PD L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 482 QLDXWPNDMQTCTXKXGSRMHNSDEM 559
+ +P D Q+C S DE+
Sbjct: 187 EFRNFPMDRQSCPVTISSYFFPEDEI 212
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 263 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 430
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 431 GSVSWIKRLDISTPISMQLDXWPNDMQ 511
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 38.3 bits (85), Expect = 0.008
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Frame = +2
Query: 275 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 436
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 437 VSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNS 550
V + + I+ M+L +P D Q C K GS +++
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLGSYSYST 106
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.011
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 242 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 376
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 107 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 271
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 272 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 376
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 35.5 bits (78), Expect = 0.056
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 341 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCT 520
+++W+PD + N ++T + + G V + +R+ + M L +P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 35.1 bits (77), Expect = 0.074
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 4/148 (2%)
Frame = +2
Query: 131 MIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSW 298
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 299 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 478
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 479 MQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
M L +P D+Q C+ S + ++D
Sbjct: 195 MDLFNFPLDVQRCSLVLESFAYTGRQID 222
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 401 YALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
+ + +VS+ G W+ ++T + + +P D Q+CT K GS +++ +D
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 66
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect(2) = 0.14
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 254 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 376
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
Score = 24.6 bits (51), Expect(2) = 0.14
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 494 WPNDMQTCTXKXGSRMHNSDEMD 562
+P D Q C K GS H+S +D
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSRLD 1531
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 419 VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGS 535
V+N G V W + S+++ WP D+Q C+ GS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 182 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 358
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 359 DVVLLN 376
D+VL N
Sbjct: 127 DIVLYN 132
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 31.9 bits (69), Expect = 0.69
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 9/160 (5%)
Frame = +2
Query: 107 ENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMN 274
E A + + +D L ++ D+ P +VV + +++ + I + +++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 275 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 439
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 440 SWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEM 559
R+ ++ M L +P D QTC S ++D +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNL 198
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 31.9 bits (69), Expect = 0.69
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 419 VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGS 535
V+N G V W + S+++ WP D+Q C+ GS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 131 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 304
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 305 GEWG-CSTWLVSSERLWRPDVVL 370
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +2
Query: 374 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSD 553
N A T + + ++ N+G W I + ++ + +P D Q C K GS +N
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64
Query: 554 EMD 562
E++
Sbjct: 65 EVN 67
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 275 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 376
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.9 bits (64), Expect = 2.8
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Frame = +2
Query: 155 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 319
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 320 STWLVSSERLWRPDVVLLNAAATTAGD---YALRARVSNNGSVSWIKRLDISTPISMQLD 490
+ E++WRPD NA A + D + + + + GS + + S L+
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHAYSDVDVLYHWVSQKEFSVGSRDMAQFYVLGAQPSTNLE 132
Query: 491 XWP 499
WP
Sbjct: 133 FWP 135
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +2
Query: 425 NNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMDXXD*XXNI--XYXP 598
+NG+ W + + +++ +P D QTC K GS H+ +D Y
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLDMSPMNLTFPTRYYQ 266
Query: 599 SSRAWDVTDLVPVRCXSXXRG 661
+ W + D+ V S G
Sbjct: 267 KNGEWSIYDIDIVGSHSQYNG 287
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +2
Query: 341 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 511
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 512 TC 517
C
Sbjct: 92 VC 93
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 29.9 bits (64), Expect = 2.8
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Frame = +2
Query: 155 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 319
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 320 STWLVSSERLWRPDVVLLNAAATTAGD---YALRARVSNNGSVSWIKRLDISTPISMQLD 490
+ E++WRPD NA A + D + + + + GS + + S L+
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHAYSDVDVLYHWVSQKEFSVGSRDMAQFYVLGAQPSTNLE 132
Query: 491 XWP 499
WP
Sbjct: 133 FWP 135
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 410 RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
+A V +NG W +I + + + +P D Q C K GS + +++
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLN 71
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 323 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 433
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 419 VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMD 562
+ + G + W + T + + +P D QTC GS +N ++D
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +2
Query: 263 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 376
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 232 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 128
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 347 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDXWPNDMQT 514
LW PD NA + + D + + ++ +GS+ + + I M L +P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 515 CTXKXGSRMHNSDEM 559
C GS + +++
Sbjct: 77 CNLVFGSYGYTDNDI 91
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 347 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 517
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 347 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDXWPNDMQT 514
LW PD NA + + D + + ++ +GS+ + + I M L +P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 515 CTXKXGSRMHNSDEM 559
C GS + +++
Sbjct: 204 CNLVFGSYGYTDNDI 218
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +2
Query: 428 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTXKXGSRMHNSDEMDXXD*XXN---IXYXP 598
NG W+ + +++ + + +P D Q C+ K GS ++ + +D + Y P
Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLVSESPSGDVSKYVP 81
Query: 599 SSRAWDVTDLVPVR 640
S + WD+ R
Sbjct: 82 SGQ-WDLVSFTAKR 94
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 28.3 bits (60), Expect = 8.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +2
Query: 110 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 277
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 278 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 376
D R N E + ++ W PD N
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106
>SB_35258| Best HMM Match : LEA_4 (HMM E-Value=1.8)
Length = 291
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/73 (19%), Positives = 33/73 (45%)
Frame = -3
Query: 234 DSRMLACLKCRVRLTTILESGGDSRSYVARSESIMRDSDVAFSHSAALAIAQVRRNGNKN 55
++R C R TT+ ++ ++R+ V +++ I R + H+ + + +RN
Sbjct: 106 NTRTTVCKAQRNTRTTVCKAQRNTRTTVCKAQHITRTTVYMAQHNTRTTVYKAQRNTRTT 165
Query: 54 NISRRHFMTTDLF 16
+H T ++
Sbjct: 166 VYKAQHITRTTVY 178
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,972,420
Number of Sequences: 59808
Number of extensions: 450558
Number of successful extensions: 1169
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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