Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_L13
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   6.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   6.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   6.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   6.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   8.9  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   8.9  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 479 GGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSN 589
           GG GG+ G   +E+  +  ST +TT + G +   G++
Sbjct: 224 GGSGGSAGNFSSESNAQMDSTTNTTSNTGGTGGTGTS 260


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 479 GGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSN 589
           GG GG+ G   +E+  +  ST +TT + G +   G++
Sbjct: 224 GGSGGSAGNFSSESNAQMDSTTNTTSNTGGTGGTGTS 260


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 479 GGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSN 589
           GG GG+ G   +E+  +  ST +TT + G +   G++
Sbjct: 224 GGSGGSAGNFSSESNAQMDSTTNTTSNTGGTGGTGTS 260


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 479 GGDGGARGPRHTETAGRHCSTPSTTPHGGVSRQCGSN 589
           GG GG+ G   +E+  +  ST +TT + G +   G++
Sbjct: 224 GGSGGSAGNFSSESNAQMDSTTNTTSNTGGTGGTGTS 260


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 536 CNAGLRFQCGEGLSRRRHLLCESGY 462
           CNA  R QC  G++  +   C+S Y
Sbjct: 409 CNAEGRCQCKPGVTGEKCDRCDSNY 433


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -1

Query: 325 IDVALGGFGFTIGGVLISIRSSTLNSLPLIGSTPFSI 215
           ID+ LGGF + + G  ++     LN+ P +    F I
Sbjct: 83  IDIVLGGFTYWLFGYAMAFGRGELNN-PFVALGDFLI 118


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 883,410
Number of Sequences: 2352
Number of extensions: 18459
Number of successful extensions: 46
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)